BLASTX nr result

ID: Scutellaria24_contig00014206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014206
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64827.1| hypothetical protein [Beta vulgaris]                   69   2e-12

>dbj|BAM64827.1| hypothetical protein [Beta vulgaris]
          Length = 2403

 Score = 68.6 bits (166), Expect(2) = 2e-12
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 19/133 (14%)
 Frame = +2

Query: 305  IGKGVLL*HNDVCDIFLLPRK-GDSI--VVDPRKKENLDCN------EQFK--------- 430
            + K  ++   DV D+F LP   G+ +  +   R  EN+D        +QF          
Sbjct: 1703 VNKEFVVTRYDVYDVFCLPMNVGNDVPEIAIVRVGENIDSQLKDVWKQQFNVHGYDGIPL 1762

Query: 431  -KIQY*FSYIIEGVGG*L*RWGDDFKRLFVTYSLSSFLTPTANRSVDVSSLKYLLDVEKI 607
             KI+     +I+G        GD+FK+LFV ++L SFLTPTANR+VD+   K L  V +I
Sbjct: 1763 GKIEARIRELIDG--------GDEFKKLFVMHALCSFLTPTANRTVDLKLAKALHVVSEI 1814

Query: 608  SSFDWCSFVLDKL 646
             ++DWCS+VL +L
Sbjct: 1815 RNYDWCSYVLGQL 1827



 Score = 29.3 bits (64), Expect(2) = 2e-12
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 250  MIKWLVKNFNGRSILLTIDRKRSVVVT 330
            M+ WLV+ FNG S++  I   +  VVT
Sbjct: 1684 MMPWLVERFNGASLMFNIGVNKEFVVT 1710


Top