BLASTX nr result

ID: Scutellaria24_contig00013996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013996
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22299.3| unnamed protein product [Vitis vinifera]              270   7e-70
ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|2...   261   3e-67
ref|NP_001190317.1| cohesin loading factor subunit SCC2 [Arabido...   253   9e-65
ref|NP_197058.2| cohesin loading factor subunit SCC2 [Arabidopsi...   253   9e-65
ref|XP_004156556.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-lik...   249   1e-63

>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score =  270 bits (689), Expect = 7e-70
 Identities = 145/273 (53%), Positives = 189/273 (69%), Gaps = 9/273 (3%)
 Frame = +3

Query: 21   NRISRNRFMSSVVHKFENPTCSDSMIPFLTYCAEILALLPFSLPDEPLYLIYIINRVVQV 200
            NR+SRN+FMSS+V KF+ P+ + S+IPFL YC EILALLPF+ PDEPLYLIY INRV+QV
Sbjct: 1449 NRVSRNKFMSSIVRKFDTPSWNHSVIPFLMYCTEILALLPFTSPDEPLYLIYAINRVIQV 1508

Query: 201  RAGTLESNMKDF-LSFFQGNAHK-SNGNGMVQLDQTLNQGSESGITMAIDGNQRI--SGE 368
            RAGTLE+NMK   L F Q + HK  + NG+ + +      S     M ++G  ++  +G+
Sbjct: 1509 RAGTLEANMKALSLHFSQRDVHKIHHENGIAEQEPASQPVSNYTTLMDVNGAAKLEPAGQ 1568

Query: 369  LQDQH-----LHVDDSCKDPNIDPMTSRNPYSISTSHLQKIQADCLAAGAMQLLLKLKRH 533
                H     L    +C D + D         IS   LQKIQADCLAA A+QLLLKLKRH
Sbjct: 1569 PDSDHATSMNLKTYMTCSDSSCD---------ISKDDLQKIQADCLAATALQLLLKLKRH 1619

Query: 534  LKIVYGLDDIRCQAFSPTEPAKPGESLLRQNVNFNAGDVNLDPPNSYEDVLRRYQDFKNA 713
            LKIVY L+D RCQAFSP EP K GE L +QN+ F   ++++D P +++++++RYQ+FK+A
Sbjct: 1620 LKIVYSLNDARCQAFSPNEPLKTGEVLTKQNIPFYITEMHIDSPTTHQELMQRYQEFKSA 1679

Query: 714  LREDTIDYSTYTASIKRKRPPSRRGAKAIRMAG 812
            L+EDT+DYS YTA+IKRKRP  RRG K+ RM G
Sbjct: 1680 LKEDTVDYSAYTANIKRKRPAPRRGVKSGRMMG 1712


>ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|222867106|gb|EEF04237.1|
            predicted protein [Populus trichocarpa]
          Length = 1815

 Score =  261 bits (667), Expect = 3e-67
 Identities = 147/294 (50%), Positives = 193/294 (65%), Gaps = 30/294 (10%)
 Frame = +3

Query: 21   NRISRNRFMSSVVHKFENPTCSDSMIPFLTYCAEILALLPFSLPDEPLYLIYIINRVVQV 200
            NR+SRN+FMSS+V KF+NP+ SDS+IPFL YC E+LALLPF+LPDEPLYLIY+INRV+QV
Sbjct: 1490 NRVSRNKFMSSIVRKFDNPSRSDSVIPFLVYCTEMLALLPFTLPDEPLYLIYVINRVIQV 1549

Query: 201  RAGTLESNMKDF-LSFFQGNAHKSNGNGMVQLDQTLNQGSESGITMAI----DGNQR--- 356
            RAG LE+NMK   L F Q NA   N N  +Q +          +   I    DG      
Sbjct: 1550 RAGALEANMKGLILHFSQRNARMVNENRFIQRELVEPVSHHMDMNGTIQPKPDGQPDHSP 1609

Query: 357  -----ISGELQDQ---HLHVDDSC-KDPNIDPMTSRNPYSISTSHLQKIQ---------- 479
                 ++G +Q+Q   H  ++ S  + P ++ ++S     IS   ++KIQ          
Sbjct: 1610 LRSFDLNGTVQEQPADHAVLNSSVSRYPKMERVSSGESVGISKDDVEKIQYCFSFLFLWV 1669

Query: 480  ---ADCLAAGAMQLLLKLKRHLKIVYGLDDIRCQAFSPTEPAKPGESLLRQNVNFNAGDV 650
                DCLAA A++LLLKLKRHLKIVYGL+D RCQAFSPTEP KPGE+  RQN+ F+    
Sbjct: 1670 VTQVDCLAATALELLLKLKRHLKIVYGLNDARCQAFSPTEPPKPGEAFSRQNIPFDMSQT 1729

Query: 651  NLDPPNSYEDVLRRYQDFKNALREDTIDYSTYTASIKRKRPPSRRGAKAIRMAG 812
                P++Y+D+++RYQ+FK AL+EDT+DYSTYTA+IKRKRP  R+  K+ R+ G
Sbjct: 1730 GTSLPSTYQDLVQRYQEFKGALKEDTVDYSTYTANIKRKRPAPRK-VKSGRVMG 1782


>ref|NP_001190317.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana]
            gi|332004792|gb|AED92175.1| cohesin loading factor
            subunit SCC2 [Arabidopsis thaliana]
          Length = 1844

 Score =  253 bits (645), Expect = 9e-65
 Identities = 130/277 (46%), Positives = 183/277 (66%), Gaps = 16/277 (5%)
 Frame = +3

Query: 21   NRISRNRFMSSVVHKFENPTCSDSMIPFLTYCAEILALLPFSLPDEPLYLIYIINRVVQV 200
            NR+SRN+FM+S+V KF+NPT + S+I FL YC E LALLPF+ PDEPLYL+Y INRV+Q+
Sbjct: 1529 NRVSRNKFMTSIVRKFDNPTWNGSVISFLKYCTETLALLPFTSPDEPLYLVYSINRVMQI 1588

Query: 201  RAGTLESNMKDFLSFFQGNAHKSNGNGMVQLD----------------QTLNQGSESGIT 332
            RAG +ESN+K  L   + +A   +GNG  Q D                +     +  G  
Sbjct: 1589 RAGAVESNLKALLH--KDSAKTQHGNGAYQQDPIPGHMNMMDLNTRIQEEPRHWNSYGHA 1646

Query: 333  MAIDGNQRISGELQDQHLHVDDSCKDPNIDPMTSRNPYSISTSHLQKIQADCLAAGAMQL 512
              ID N  +  + +DQ           ++  MTS +P  +ST  LQKIQ DCLAA A+QL
Sbjct: 1647 TLIDLNGSVYQDSRDQFTSYQVHNGKADVHKMTSSDPPELSTDDLQKIQVDCLAAIAIQL 1706

Query: 513  LLKLKRHLKIVYGLDDIRCQAFSPTEPAKPGESLLRQNVNFNAGDVNLDPPNSYEDVLRR 692
            LLKLKR+LK+ Y L+D RCQA+SPTEP KPG+ L RQ+V F+  +   D P++Y+D+++R
Sbjct: 1707 LLKLKRYLKVTYSLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQR 1766

Query: 693  YQDFKNALREDTIDYSTYTASIKRKRPPSRRGAKAIR 803
            YQ+FKNA+REDT+D++ Y+ ++KRKRP  R+ +++ +
Sbjct: 1767 YQEFKNAMREDTVDFTIYSTNVKRKRPTPRKTSRSAK 1803


>ref|NP_197058.2| cohesin loading factor subunit SCC2 [Arabidopsis thaliana]
            gi|146230097|gb|ABQ12620.1| sister chromatid cohesion 2
            [Arabidopsis thaliana] gi|332004791|gb|AED92174.1|
            cohesin loading factor subunit SCC2 [Arabidopsis
            thaliana]
          Length = 1846

 Score =  253 bits (645), Expect = 9e-65
 Identities = 130/277 (46%), Positives = 183/277 (66%), Gaps = 16/277 (5%)
 Frame = +3

Query: 21   NRISRNRFMSSVVHKFENPTCSDSMIPFLTYCAEILALLPFSLPDEPLYLIYIINRVVQV 200
            NR+SRN+FM+S+V KF+NPT + S+I FL YC E LALLPF+ PDEPLYL+Y INRV+Q+
Sbjct: 1531 NRVSRNKFMTSIVRKFDNPTWNGSVISFLKYCTETLALLPFTSPDEPLYLVYSINRVMQI 1590

Query: 201  RAGTLESNMKDFLSFFQGNAHKSNGNGMVQLD----------------QTLNQGSESGIT 332
            RAG +ESN+K  L   + +A   +GNG  Q D                +     +  G  
Sbjct: 1591 RAGAVESNLKALLH--KDSAKTQHGNGAYQQDPIPGHMNMMDLNTRIQEEPRHWNSYGHA 1648

Query: 333  MAIDGNQRISGELQDQHLHVDDSCKDPNIDPMTSRNPYSISTSHLQKIQADCLAAGAMQL 512
              ID N  +  + +DQ           ++  MTS +P  +ST  LQKIQ DCLAA A+QL
Sbjct: 1649 TLIDLNGSVYQDSRDQFTSYQVHNGKADVHKMTSSDPPELSTDDLQKIQVDCLAAIAIQL 1708

Query: 513  LLKLKRHLKIVYGLDDIRCQAFSPTEPAKPGESLLRQNVNFNAGDVNLDPPNSYEDVLRR 692
            LLKLKR+LK+ Y L+D RCQA+SPTEP KPG+ L RQ+V F+  +   D P++Y+D+++R
Sbjct: 1709 LLKLKRYLKVTYSLNDDRCQAYSPTEPLKPGDPLSRQSVAFDLSETRTDLPSTYQDLVQR 1768

Query: 693  YQDFKNALREDTIDYSTYTASIKRKRPPSRRGAKAIR 803
            YQ+FKNA+REDT+D++ Y+ ++KRKRP  R+ +++ +
Sbjct: 1769 YQEFKNAMREDTVDFTIYSTNVKRKRPTPRKTSRSAK 1805


>ref|XP_004156556.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Cucumis
            sativus]
          Length = 1819

 Score =  249 bits (635), Expect = 1e-63
 Identities = 140/282 (49%), Positives = 182/282 (64%), Gaps = 23/282 (8%)
 Frame = +3

Query: 21   NRISRNRFMSSVVHKFENPTCSDSMIPFLTYCAEILALLPFSLPDEPLYLIYIINRVVQV 200
            NR+SRN F+SS+V KF++P  +DSMIPFL YCAEILALLPF+ PDEPLYLIY INR++QV
Sbjct: 1500 NRVSRNNFISSIVRKFDSPRMNDSMIPFLMYCAEILALLPFTFPDEPLYLIYAINRIIQV 1559

Query: 201  RAGTLESNMKDF-LSFFQGNAHK-SNGNGMVQLDQT-----------------LNQGSES 323
            R G L+  +K   +   Q N    +  NGM+QL Q                  L+Q    
Sbjct: 1560 RGGALQEEIKALSVHLLQRNTQNVTYENGMIQLPQPGLFSDNIILSDMNGSAELDQPRPI 1619

Query: 324  GITMAIDGNQRISGELQDQH-LHVDDSCKDPNIDPMTSRNPYSISTSHLQKIQA---DCL 491
               M++D NQ+I  E    H L+ + S  +  +  ++S + +SIS   LQKIQ     CL
Sbjct: 1620 CNFMSMDLNQQIPPESAAHHELNNNSSKLEGKLHNISSMDSFSISKDDLQKIQVISNSCL 1679

Query: 492  AAGAMQLLLKLKRHLKIVYGLDDIRCQAFSPTEPAKPGESLLRQNVNFNAGDVNLDPPNS 671
            AA A+QLLLKLKRHLKIVY L+D RCQ+F+P EP KPGE L +QNV F+  +     P +
Sbjct: 1680 AAIALQLLLKLKRHLKIVYSLNDARCQSFNPNEPPKPGEFLSKQNVPFDISETCTTLPTT 1739

Query: 672  YEDVLRRYQDFKNALREDTIDYSTYTASIKRKRPPSRRGAKA 797
            Y++ ++ YQDFKN LR+D  DYSTYTA+IKRKRP  R+G K+
Sbjct: 1740 YQEFIQSYQDFKNTLRDDAFDYSTYTANIKRKRPTVRKGRKS 1781


Top