BLASTX nr result

ID: Scutellaria24_contig00013818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013818
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...   181   2e-43
ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...   177   2e-42
ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein ...   166   5e-39
ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin...   162   7e-38
gb|AFK47684.1| unknown [Lotus japonicus]                              157   2e-36

>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  181 bits (458), Expect = 2e-43
 Identities = 97/146 (66%), Positives = 110/146 (75%)
 Frame = +1

Query: 79  MAFASAFRRILNGSSAPSLNIRSQFSSIRLNSTLATLTSPKLFVSGLSRTTTDEKLREAF 258
           MAFAS+FRR+L GSS     ++SQFS  R NST+   TSPKLFVSGLSR TTDEKL+EAF
Sbjct: 1   MAFASSFRRVLTGSSTI---LQSQFSPARFNSTV---TSPKLFVSGLSRLTTDEKLKEAF 54

Query: 259 APFGRLQEAKVIIDRGSGRSKGFGFVSYESIEEAEKAREGMNAKFLDGWVIFVDXXXXXX 438
           +PFG+L EAKVI DR SGRSKGFGFV+Y ++EEAEKAREGMNAKFLDGWVIFVD      
Sbjct: 55  SPFGQLLEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWVIFVDPAKPRE 114

Query: 439 XXXXXXXXXXSSGTGFTSNKTVGWSG 516
                     SS TGF +NKT+GW G
Sbjct: 115 PRPPPQQEPESSETGFRTNKTIGWCG 140


>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score =  177 bits (449), Expect = 2e-42
 Identities = 97/146 (66%), Positives = 106/146 (72%)
 Frame = +1

Query: 79  MAFASAFRRILNGSSAPSLNIRSQFSSIRLNSTLATLTSPKLFVSGLSRTTTDEKLREAF 258
           MAF   F R+L  S +P ++  S F+SIRLNSTL   TSPKLF+SGLSR TTDEKL EAF
Sbjct: 1   MAFFFGFHRLLRHSQSPLVS--SHFTSIRLNSTL---TSPKLFISGLSRLTTDEKLTEAF 55

Query: 259 APFGRLQEAKVIIDRGSGRSKGFGFVSYESIEEAEKAREGMNAKFLDGWVIFVDXXXXXX 438
           +PFG+L EAKVI DRGSGRSKGF FVSY +IEEAEKAREGMNAKFLDGWVIFVD      
Sbjct: 56  SPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE 115

Query: 439 XXXXXXXXXXSSGTGFTSNKTVGWSG 516
                      S TGFT NKTVGW G
Sbjct: 116 PRPPQQSQSQPSQTGFTVNKTVGWCG 141


>ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 146

 Score =  166 bits (420), Expect = 5e-39
 Identities = 88/149 (59%), Positives = 109/149 (73%), Gaps = 3/149 (2%)
 Frame = +1

Query: 79  MAFASAFRRILNGSSAPSLN---IRSQFSSIRLNSTLATLTSPKLFVSGLSRTTTDEKLR 249
           MAF S  RR+LNGSS+ S +   +RSQ++++RL+STL   TSPKLF+SGLSR TTDEKLR
Sbjct: 1   MAFFSTVRRVLNGSSSSSSSSSILRSQWNAVRLSSTL---TSPKLFISGLSRLTTDEKLR 57

Query: 250 EAFAPFGRLQEAKVIIDRGSGRSKGFGFVSYESIEEAEKAREGMNAKFLDGWVIFVDXXX 429
           EAF+ FG+L +AKV+ DR +GRSKGF FV+Y +I+EAEKARE MNAKFLDGWVIFVD   
Sbjct: 58  EAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVIFVDPAK 117

Query: 430 XXXXXXXXXXXXXSSGTGFTSNKTVGWSG 516
                        +S  G  +NKT+GW G
Sbjct: 118 PREPRPPPQPQSETSEFGIRTNKTIGWCG 146


>ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
           gi|255628209|gb|ACU14449.1| unknown [Glycine max]
          Length = 139

 Score =  162 bits (410), Expect = 7e-38
 Identities = 90/146 (61%), Positives = 102/146 (69%)
 Frame = +1

Query: 79  MAFASAFRRILNGSSAPSLNIRSQFSSIRLNSTLATLTSPKLFVSGLSRTTTDEKLREAF 258
           MAF S  +R+L  +      + S ++SIRL+STL   TSPKLFVSGL R T DEKL+EAF
Sbjct: 1   MAFMSGVQRLLRRTPL----VHSHYASIRLSSTL---TSPKLFVSGLCRLTIDEKLKEAF 53

Query: 259 APFGRLQEAKVIIDRGSGRSKGFGFVSYESIEEAEKAREGMNAKFLDGWVIFVDXXXXXX 438
           + FG+L EAKVIIDR SGRSKGF FV+Y +IEEAEKAREGMNAKFLDGWVIFVD      
Sbjct: 54  SSFGQLVEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE 113

Query: 439 XXXXXXXXXXSSGTGFTSNKTVGWSG 516
                      S TGFT NKTVGW G
Sbjct: 114 PRPPQQSQSQPSETGFTVNKTVGWCG 139


>gb|AFK47684.1| unknown [Lotus japonicus]
          Length = 138

 Score =  157 bits (398), Expect = 2e-36
 Identities = 92/147 (62%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
 Frame = +1

Query: 79  MAFASAFRRILNGSSAPSLNIRSQFSSIRLNSTLATLTSPKLFVSGLSRTTTDEKLREAF 258
           MAF S  +R L  SS          +S+RL ST  TLT+PKLF+SGLSR TTD KL EAF
Sbjct: 1   MAFFSGVQRFLRQSS-------HNLTSVRLCST--TLTTPKLFISGLSRQTTDRKLNEAF 51

Query: 259 APFGRLQEAKVIIDRGSGRSKGFGFVSYESIEEAEKAREGMNAKFLDGWVIFVDXXXXXX 438
           APFG+L EAKVI DR SGRSKGFGFVSY SIEEAEKA +GMNAKFLDGWVIFVD      
Sbjct: 52  APFGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGMNAKFLDGWVIFVDPAKPRE 111

Query: 439 XXXXXXXXXXS-SGTGFTSNKTVGWSG 516
                       S TGFT NKTVGW G
Sbjct: 112 PRPPMQSESQQPSETGFTVNKTVGWCG 138