BLASTX nr result

ID: Scutellaria24_contig00013645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013645
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus tr...   149   3e-34
pir||T08999 hypothetical protein - spinach chloroplast                135   5e-30
gb|AFK34406.1| unknown [Lotus japonicus]                              134   6e-30
ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp....   130   9e-29
ref|XP_004174110.1| PREDICTED: photosystem II reaction center pr...   125   4e-27

>ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus trichocarpa]
           gi|133712057|gb|ABO36700.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 113

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/90 (84%), Positives = 78/90 (86%)
 Frame = +3

Query: 36  IWDK*VQDMRELRIPTRKTNPIHNDVPENTTFLLLDHPSGEANTTGTLINKIDEVAINAK 215
           IW   VQ+MRELRIPTRKTNPIHNDVPENTTFLLLD PSGE  TTGTLINKIDEVAINAK
Sbjct: 18  IW---VQEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEKTTGTLINKIDEVAINAK 74

Query: 216 TANWKTRVILLILQDTNK*TIPFDPSISQK 305
           TANWK  V+ LILQ TNK TIPFDPSI QK
Sbjct: 75  TANWKAIVMFLILQATNKRTIPFDPSIRQK 104


>pir||T08999 hypothetical protein - spinach chloroplast
          Length = 90

 Score =  135 bits (339), Expect = 5e-30
 Identities = 68/80 (85%), Positives = 70/80 (87%)
 Frame = +3

Query: 60  MRELRIPTRKTNPIHNDVPENTTFLLLDHPSGEANTTGTLINKIDEVAINAKTANWKTRV 239
           MRELRIPTRKTNP HNDVPENT FLLLD PSGEANTTGTLI+KIDEVAINAKTANWK  V
Sbjct: 1   MRELRIPTRKTNPSHNDVPENTIFLLLDQPSGEANTTGTLISKIDEVAINAKTANWKAIV 60

Query: 240 ILLILQDTNK*TIPFDPSIS 299
           I +ILQ   K TIPFDPSIS
Sbjct: 61  IRIILQAIKKQTIPFDPSIS 80


>gb|AFK34406.1| unknown [Lotus japonicus]
          Length = 80

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/77 (87%), Positives = 69/77 (89%)
 Frame = +3

Query: 60  MRELRIPTRKTNPIHNDVPENTTFLLLDHPSGEANTTGTLINKIDEVAINAKTANWKTRV 239
           MRELRIPTR TN IHNDVPENTTFLLLD PSGEANTTGTLINK++EVAINAKTANWK  V
Sbjct: 1   MRELRIPTRNTNAIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 60

Query: 240 ILLILQDTNK*TIPFDP 290
           I LILQ TNK TIPFDP
Sbjct: 61  IFLILQITNKRTIPFDP 77


>ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334191|gb|EFH64609.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 76

 Score =  130 bits (328), Expect = 9e-29
 Identities = 65/73 (89%), Positives = 69/73 (94%)
 Frame = -1

Query: 274 VYLLVSWRIKRMTLVFQLAVFALIATSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIG 95
           + LL++WRIK MT+ FQLAVFALI TSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIG
Sbjct: 4   ILLLIAWRIKNMTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIG 63

Query: 94  LVFLVGILNSLIS 56
           LVFLVGILNSLIS
Sbjct: 64  LVFLVGILNSLIS 76


>ref|XP_004174110.1| PREDICTED: photosystem II reaction center protein Z-like [Cucumis
           sativus]
          Length = 76

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/71 (88%), Positives = 65/71 (91%)
 Frame = -1

Query: 268 LLVSWRIKRMTLVFQLAVFALIATSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLV 89
           LLV WRI+ MT+ FQLAVFALI TSSILLISVPVVFASPDGWS NK VVFSGTSLWIGLV
Sbjct: 6   LLVDWRIRNMTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKKVVFSGTSLWIGLV 65

Query: 88  FLVGILNSLIS 56
           FLVGILNSLIS
Sbjct: 66  FLVGILNSLIS 76


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