BLASTX nr result

ID: Scutellaria24_contig00013531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013531
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2...   279   8e-73
ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   264   3e-68
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   261   2e-67
gb|AFK44009.1| unknown [Lotus japonicus]                              256   9e-66

>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  279 bits (714), Expect = 8e-73
 Identities = 145/310 (46%), Positives = 195/310 (62%), Gaps = 31/310 (10%)
 Frame = +1

Query: 142 MSINGSTHWCYNCQEPVLLR-RQNVCANCERGFVQELED----------GVSTNADEHNQ 288
           MS + +THWCY+C+ PV LR R + C  C  GFVQEL+D          G+ ++ D+ +Q
Sbjct: 1   MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDMHRISPLDFFGMDSD-DDRDQ 59

Query: 289 RPRFMESVSNFLRQRRAVRSNPSD-------------SWSSLLVFSGDMPVRMPGEGGIL 429
           R   ME+ S+F+RQR A RS+  D              +  LL+F G +P R+ G GG  
Sbjct: 60  RFGLMEAFSDFMRQRMADRSHNHDIRSRSDSVPGHNPGFGPLLIFGGQVPFRLSGNGGFE 119

Query: 430 EFLNETLG--FRRENGGDYFVGPGVEEFFEHVTDNDQRVPPPASRSSIEALPTVKISKKH 603
              +   G  F R N GDYF+GPG+EE FE ++ NDQR PPPA+RSSI+A+PT+KI++KH
Sbjct: 120 ALFSGAPGVAFARGNAGDYFIGPGLEELFEQLSANDQRGPPPATRSSIDAMPTIKITQKH 179

Query: 604 IREDSTCAVCKEEFELGSQVRKLPCKHLYHSDCIVPWLEQRSTCPVCRQEV-----TGQN 768
           +R DS C VCK++FELGS+ R++PC HLYHSDCIVPWL Q ++CPVCRQE+     + ++
Sbjct: 180 LRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSSSRH 239

Query: 769 LWEQNXXXXXXXXXXXXEETAGNQGRRRRWSFLWPFRGSRPNSNHNETVESSSVQYHEDN 948
            ++ +            E + G  GRR   S+LWPFR S  +SNH+ET ESSS   HE+N
Sbjct: 240 SYQSSSSRSRSSNYSGRENSRG--GRRNPLSYLWPFRSSNSSSNHDETPESSSPAMHENN 297

Query: 949 QHGEYSYWPF 978
            H  YS WPF
Sbjct: 298 PHMGYSGWPF 307


>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  270 bits (691), Expect = 4e-70
 Identities = 142/310 (45%), Positives = 189/310 (60%), Gaps = 30/310 (9%)
 Frame = +1

Query: 139 KMSINGSTHWCYNCQEPVLLR-RQNVCANCERGFVQELEDGVSTNA---------DEHNQ 288
           +MS + +THWCY+C+ PV LR R   C  C  GFVQEL+D    N          D+H+ 
Sbjct: 3   RMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDMHRINPLDFFGMDGDDDHDN 62

Query: 289 RPRFMESVSNFLRQRRAVRSNPSD-------------SWSSLLVFSGDMPVRMPGEGGIL 429
               ME+ S F+RQR A RS+  D              +  LL+F G +P R+ G GG+ 
Sbjct: 63  MFGLMEAFSAFMRQRMADRSHNHDIRSRSDSIPEHNPGFGPLLIFGGQIPFRLSGNGGLE 122

Query: 430 EFLNETLG--FRRENGGDYFVGPGVEEFFEHVTDNDQRVPPPASRSSIEALPTVKISKKH 603
              + + G  F R N GDYFVGPG+EE FE ++ ND+R PPPA+RSSI+A+PT+KI++KH
Sbjct: 123 ALFSGSPGVAFARGNAGDYFVGPGLEELFEQLSANDRRGPPPATRSSIDAMPTIKITQKH 182

Query: 604 IREDSTCAVCKEEFELGSQVRKLPCKHLYHSDCIVPWLEQRSTCPVCRQEVTGQ-----N 768
           +R DS C VCK++FELGS+ R++PC HLYHSDCIVPWL Q ++CPVCRQE+  Q     +
Sbjct: 183 LRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQELPPQGSNSGH 242

Query: 769 LWEQNXXXXXXXXXXXXEETAGNQGRRRRWSFLWPFRGSRPNSNHNETVESSSVQYHEDN 948
            ++ +            E +   +GRR   S+LWPFR S  +SNH+ET  SSS   HE+N
Sbjct: 243 SYQSSSSRSRSSNYSGRENS--REGRRNPLSYLWPFRSSNSSSNHDETPGSSSPTMHENN 300

Query: 949 QHGEYSYWPF 978
               YS WPF
Sbjct: 301 HQMGYSGWPF 310


>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449529445|ref|XP_004171710.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 305

 Score =  264 bits (675), Expect = 3e-68
 Identities = 138/302 (45%), Positives = 183/302 (60%), Gaps = 27/302 (8%)
 Frame = +1

Query: 157 STHWCYNCQEPVLLR-RQNVCANCERGFVQELED----------GVSTNADEHNQRPRFM 303
           +THWCY C++PV LR R   C +C  GFVQEL++          G S N +  N+R   +
Sbjct: 5   NTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGN-EYQNRRLGLL 63

Query: 304 ESVSNFLRQRRAVRSNPSDSWSSL----------LVFSGDMPVRMPGEGGILEFLNET-- 447
           E  SNF+RQR   R++      S+          L+F G +PVR+ G GG   F N    
Sbjct: 64  ELFSNFMRQRLVDRNDIRGRLDSIPDHGPGFGPWLIFGGQIPVRLSGHGGFEAFFNGVPG 123

Query: 448 LGFRRENGGDYFVGPGVEEFFEHVTDNDQRVPPPASRSSIEALPTVKISKKHIREDSTCA 627
           +G  R NGGDYF+GPG+EE FE ++ ND+R PPPASRSSI+A+P VKI+++HIR +S C 
Sbjct: 124 IGVSRSNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNSHCP 183

Query: 628 VCKEEFELGSQVRKLPCKHLYHSDCIVPWLEQRSTCPVCRQEVTGQ---NLWEQNXXXXX 798
           VC+++FELGS+ R++PC H+YHSDCIVPWL Q ++CPVCRQE+  Q   +    +     
Sbjct: 184 VCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSSHSSSGSNNS 243

Query: 799 XXXXXXXEETAGNQGRRRRWSFLWPFRGSRPNSNHNETVESSSVQYHEDNQHGE-YSYWP 975
                  E     QGRR  ++ LWPFR S  NSNH+ T  S+S   HE NQH   Y  WP
Sbjct: 244 SRNSRDRENGRTTQGRRNPFTSLWPFRASSSNSNHSATTGSNSPALHETNQHETGYYGWP 303

Query: 976 FE 981
           F+
Sbjct: 304 FD 305


>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score =  261 bits (668), Expect = 2e-67
 Identities = 138/309 (44%), Positives = 185/309 (59%), Gaps = 29/309 (9%)
 Frame = +1

Query: 142 MSINGSTHWCYNCQEPVLL-RRQNVCANCERGFVQELEDGVSTNA---------DEHNQR 291
           MS + +THWCY+C+ PV L RR  VC +C  GFV EL D V  N          +E +QR
Sbjct: 1   MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQR 60

Query: 292 PRFMESVSNFLRQRRAVR-----------SNPSDS--WSSLLVFSGDMPVRMPGEGGILE 432
              ME+ S F+R + A R           SNP  S  ++ LL+F G +P R+ G GG   
Sbjct: 61  LGLMETFSAFMRHQMADRGRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFRLSGHGGFEA 120

Query: 433 FLNET--LGFRRENGGDYFVGPGVEEFFEHVTDNDQRVPPPASRSSIEALPTVKISKKHI 606
             N    +G  R N GDYF+GPG+EE FE ++ N+++ PPPASRSSI+A+PT+KI+++H+
Sbjct: 121 LFNGAPGIGLTRGNTGDYFIGPGLEELFEQLSANNRQGPPPASRSSIDAMPTIKITQRHL 180

Query: 607 REDSTCAVCKEEFELGSQVRKLPCKHLYHSDCIVPWLEQRSTCPVCRQEVTGQNLWEQNX 786
           R DS C VCK++FE+GS+ R++PC HLYHSDCIVPWL Q ++CPVCRQE+  Q L   N 
Sbjct: 181 RSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELLPQGLSSSNR 240

Query: 787 XXXXXXXXXXXEETA-GNQGRRRRWSFLWPFRGSRPNSNHNETVESS---SVQYHEDNQH 954
                        +   + GRR  +SFLWPFR S  +SN   T  SS   ++  +  + H
Sbjct: 241 STNGRSRSASLSSSGRESHGRRNPFSFLWPFRSSHSSSNDEATGSSSPTPTIPENSHHHH 300

Query: 955 GEYSYWPFE 981
             YS WPFE
Sbjct: 301 AGYSGWPFE 309


>gb|AFK44009.1| unknown [Lotus japonicus]
          Length = 293

 Score =  256 bits (653), Expect = 9e-66
 Identities = 130/287 (45%), Positives = 176/287 (61%), Gaps = 25/287 (8%)
 Frame = +1

Query: 142 MSINGSTHWCYNCQEPVLLR-RQNVCANCERGFVQELEDGVSTNA---------DEHNQR 291
           MS + +THWC++C+ PV L  R ++C +C  GFVQEL+D V  N          +EH QR
Sbjct: 1   MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQR 60

Query: 292 PRFMESVSNFLRQRRAVRSNPSD-------------SWSSLLVFSGDMPVRMPGEGGILE 432
              ME+ S F+R +   RS+  D              ++ LL+F G +P R+ G GGI  
Sbjct: 61  FGLMETFSGFMRHQMGNRSHRHDIRAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGIEA 120

Query: 433 FLNET--LGFRRENGGDYFVGPGVEEFFEHVTDNDQRVPPPASRSSIEALPTVKISKKHI 606
             N    +G  R N GDYF+GPG+EE FE ++ N+Q+ PPPASRSSI+ALPT++I K+H+
Sbjct: 121 LFNGAPGIGMTRGNTGDYFIGPGLEEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHL 180

Query: 607 REDSTCAVCKEEFELGSQVRKLPCKHLYHSDCIVPWLEQRSTCPVCRQEVTGQNLWEQNX 786
           R DS C +CKE+FELGS+ R++PCKH+YH DCIVPWL + ++CPVCRQE+  Q L   N 
Sbjct: 181 RSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQVLSGSNG 240

Query: 787 XXXXXXXXXXXEETAGNQGRRRRWSFLWPFRGSRPNSNHNETVESSS 927
                        +  NQGRR  +SFLWPFR S   SN+  T  +S+
Sbjct: 241 RRSRSSNANERVSSRENQGRRNPFSFLWPFRSSISGSNNRATGRTST 287


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