BLASTX nr result

ID: Scutellaria24_contig00013430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013430
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   104   7e-21
ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   104   7e-21
gb|ACU23866.1| unknown [Glycine max]                                  103   2e-20
gb|ACO54858.1| zinc finger protein ZF3 [Cicer arietinum]              102   2e-20
emb|CBI27968.3| unnamed protein product [Vitis vinifera]              102   3e-20

>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/104 (53%), Positives = 68/104 (65%)
 Frame = +2

Query: 17  MMLGERSFAGTTVHVPPWSEDPASFAGGVDDYSLFFQTDSLKALQRYLPSNSNDAVPEFQ 196
           MMLGE   A  TVHVPPW+ +  S   G  DYS +   ++L ALQ Y    S DA    +
Sbjct: 1   MMLGETHRANPTVHVPPWTPEIFSPYTGNADYSPYSLQEALSALQHY---ESTDA----E 53

Query: 197 SDSDNCGGGDFLPVDAHSCDNFRIFEFKVRKCTRGRSHDWTECP 328
           SDS+       +PVDA+SCD+FR+FEFKVR+C RGRSHDWTECP
Sbjct: 54  SDSEFPSREPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECP 97


>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 10/114 (8%)
 Frame = +2

Query: 17  MMLGERSFAGTTVHVPPWS--EDP------ASFAGGVD--DYSLFFQTDSLKALQRYLPS 166
           MMLGE   A  TVHVPPW   +DP      A     V+  +YS ++  ++L ALQR+LPS
Sbjct: 1   MMLGEHHRANPTVHVPPWPTHDDPTAEMYSAFLTNDVNAGEYSPYYLQEALTALQRFLPS 60

Query: 167 NSNDAVPEFQSDSDNCGGGDFLPVDAHSCDNFRIFEFKVRKCTRGRSHDWTECP 328
           N  DA  + ++  D         VDA+SCD+FR++EFKVR+C RGRSHDWTECP
Sbjct: 61  NETDADSDTEAQPDAA-------VDAYSCDHFRMYEFKVRRCARGRSHDWTECP 107


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/104 (50%), Positives = 67/104 (64%)
 Frame = +2

Query: 17  MMLGERSFAGTTVHVPPWSEDPASFAGGVDDYSLFFQTDSLKALQRYLPSNSNDAVPEFQ 196
           MMLGE   A   VHVPPW+ +  S   G  DYS +   ++L ALQ Y  +N+       +
Sbjct: 1   MMLGETHRANPAVHVPPWTPEIFSPYTGNADYSPYSLQEALSALQHYESTNA-------E 53

Query: 197 SDSDNCGGGDFLPVDAHSCDNFRIFEFKVRKCTRGRSHDWTECP 328
           SDS+       +PVDA+SCD+FR+FEFKVR+C RGRSHDWTECP
Sbjct: 54  SDSEFPSREPEVPVDAYSCDHFRMFEFKVRRCARGRSHDWTECP 97


>gb|ACO54858.1| zinc finger protein ZF3 [Cicer arietinum]
          Length = 385

 Score =  102 bits (255), Expect = 2e-20
 Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
 Frame = +2

Query: 14  NMMLGERSF-AGTTVHVPPW---SEDPASFAGGV---DDYSLFFQTDSLKALQRYLPSNS 172
           +MMLGE       T+HVPPW   S+  A     +   DDYS ++  ++L ALQ Y+PSN 
Sbjct: 2   SMMLGEPPHRTNPTIHVPPWQMMSDSTAEIFSPLTTNDDYSPYYLQEALSALQHYIPSNE 61

Query: 173 NDAVPEFQSDSDNCGGGDFLPVDAHSCDNFRIFEFKVRKCTRGRSHDWTECP 328
           +D       DSD+        VD +SCDNFR+FEFK+R+C RGRSHDWTECP
Sbjct: 62  HD------DDSDSDAIPSHESVDVYSCDNFRMFEFKIRRCARGRSHDWTECP 107


>emb|CBI27968.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/109 (54%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
 Frame = +2

Query: 17  MMLGERSFAGTTVHVPPWS--EDPA---SFAGGVDDYSLFFQTDSLKALQRYLPSNSNDA 181
           MM+GE      TV VPPW   +DP    SF   V   S      +L ALQRYLPSN  D 
Sbjct: 1   MMIGESRHPNPTVLVPPWPHFDDPTVDISFPYPVSGVS------ALTALQRYLPSNDVDV 54

Query: 182 VPEFQSDSDNCGGGDFLPVDAHSCDNFRIFEFKVRKCTRGRSHDWTECP 328
                SDSD  G    +PVDA+SCD+FR+FEFKVR+C RGRSHDWTECP
Sbjct: 55  ----DSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTECP 99


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