BLASTX nr result

ID: Scutellaria24_contig00013330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013330
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36012.3| unnamed protein product [Vitis vinifera]              130   8e-29
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   130   8e-29
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   130   8e-29
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   127   1e-27
ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II tra...   126   2e-27

>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   LSKMTGTEYTLSEVLEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARV 180
           LSKMTGTEY L+EV+EPHLFV RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVF AR+
Sbjct: 54  LSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARI 113

Query: 181 GRALYHI 201
           GRALYHI
Sbjct: 114 GRALYHI 120


>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   LSKMTGTEYTLSEVLEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARV 180
           LSKMTGTEY L+EV+EPHLFV RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVF AR+
Sbjct: 86  LSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARI 145

Query: 181 GRALYHI 201
           GRALYHI
Sbjct: 146 GRALYHI 152


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  130 bits (328), Expect = 8e-29
 Identities = 61/67 (91%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   LSKMTGTEYTLSEVLEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARV 180
           LSKMTGTEY L+EV+EPHLFV RKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVF AR+
Sbjct: 81  LSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFTARI 140

Query: 181 GRALYHI 201
           GRALYHI
Sbjct: 141 GRALYHI 147


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/67 (88%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   LSKMTGTEYTLSEVLEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARV 180
           LSKMTGTEY L+EV+EP+LFV RKQKRD PEKVTPMLTYY+LDGSIYQAPQLCNVFAAR+
Sbjct: 80  LSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQLCNVFAARI 139

Query: 181 GRALYHI 201
           GRALYHI
Sbjct: 140 GRALYHI 146


>ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Cucumis sativus]
          Length = 226

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = +1

Query: 1   LSKMTGTEYTLSEVLEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARV 180
           LSKMTG EY L+EV+EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARV
Sbjct: 54  LSKMTGIEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARV 113

Query: 181 GRALYHI 201
            RALY+I
Sbjct: 114 SRALYYI 120


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