BLASTX nr result

ID: Scutellaria24_contig00013199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013199
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus c...   108   2e-23
ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...    89   6e-18
ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260...    94   9e-18
emb|CBI24209.3| unnamed protein product [Vitis vinifera]               94   9e-18
emb|CAN78969.1| hypothetical protein VITISV_022739 [Vitis vinifera]    94   9e-18

>ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus communis]
            gi|223547443|gb|EEF48938.1| hypothetical protein
            RCOM_1578820 [Ricinus communis]
          Length = 1915

 Score =  108 bits (271), Expect(2) = 2e-23
 Identities = 58/100 (58%), Positives = 65/100 (65%)
 Frame = -3

Query: 341  KNHLIDIMCHIICIEDHLQGLLLGPWLNPAYSLLWRKSVLGAPDIASVKXXXXXXXXXXX 162
            K HL DI+ H++ IED LQGLLLGPWLNP YS LWRKSVL A DI S+K           
Sbjct: 1121 KGHLTDIISHVLVIEDRLQGLLLGPWLNPNYSKLWRKSVLKASDIVSLKHLLLTLESNLS 1180

Query: 161  XXXLSADWRKHVDSVATMGSASHIVSNSARASSNMELTGK 42
               LSA+W KHVDS   MGSASHIV  S RASS   ++ K
Sbjct: 1181 RLALSAEWLKHVDSSPRMGSASHIVMASLRASSKNGISKK 1220



 Score = 24.6 bits (52), Expect(2) = 2e-23
 Identities = 12/22 (54%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = -2

Query: 63   KHGINRKRAKSSEV-NGPSSNA 1
            K+GI++KRA+ SE  + PSSN+
Sbjct: 1214 KNGISKKRARFSEFDSNPSSNS 1235


>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
            gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
            binding protein [Medicago truncatula]
          Length = 1573

 Score = 89.4 bits (220), Expect(2) = 6e-18
 Identities = 49/97 (50%), Positives = 57/97 (58%)
 Frame = -3

Query: 353  RKSVKNHLIDIMCHIICIEDHLQGLLLGPWLNPAYSLLWRKSVLGAPDIASVKXXXXXXX 174
            RK    HL  I+CHI  +E  L+GLLLGPWLN   + LW + +L   D  SVK       
Sbjct: 1168 RKIQNGHLRAIICHIFSLEVRLRGLLLGPWLNLHQTNLWHEDLLKTFDFLSVKRVLLLLE 1227

Query: 173  XXXXXXXLSADWRKHVDSVATMGSASHIVSNSARASS 63
                   LSADW KHVDSV TMGSA+HIV N +R SS
Sbjct: 1228 SNLRHRALSADWLKHVDSVGTMGSATHIVVNLSRTSS 1264



 Score = 26.2 bits (56), Expect(2) = 6e-18
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 63   KHGINRKRAKSSEVNGPSSN 4
            KHG+ +KRA+ S++   SS+
Sbjct: 1265 KHGVGKKRARHSDIESSSSS 1284


>ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260139 [Vitis vinifera]
          Length = 1976

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/100 (50%), Positives = 67/100 (67%)
 Frame = -3

Query: 356  SRKSVKNHLIDIMCHIICIEDHLQGLLLGPWLNPAYSLLWRKSVLGAPDIASVKXXXXXX 177
            S+K+ K HL+D++ +I+ IE  L+GLL+GPW+NP ++ LW K+ L A D+ASVK      
Sbjct: 1009 SKKNRKGHLVDVINYILSIEVRLRGLLMGPWMNPHHAKLWCKNALKASDVASVKHLLLTL 1068

Query: 176  XXXXXXXXLSADWRKHVDSVATMGSASHIVSNSARASSNM 57
                    LSADW K +DS  TMGSASHIV  S+RASS +
Sbjct: 1069 ESNLRRLALSADWLKQMDSFITMGSASHIVI-SSRASSKL 1107


>emb|CBI24209.3| unnamed protein product [Vitis vinifera]
          Length = 1805

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/100 (50%), Positives = 67/100 (67%)
 Frame = -3

Query: 356  SRKSVKNHLIDIMCHIICIEDHLQGLLLGPWLNPAYSLLWRKSVLGAPDIASVKXXXXXX 177
            S+K+ K HL+D++ +I+ IE  L+GLL+GPW+NP ++ LW K+ L A D+ASVK      
Sbjct: 964  SKKNRKGHLVDVINYILSIEVRLRGLLMGPWMNPHHAKLWCKNALKASDVASVKHLLLTL 1023

Query: 176  XXXXXXXXLSADWRKHVDSVATMGSASHIVSNSARASSNM 57
                    LSADW K +DS  TMGSASHIV  S+RASS +
Sbjct: 1024 ESNLRRLALSADWLKQMDSFITMGSASHIVI-SSRASSKL 1062


>emb|CAN78969.1| hypothetical protein VITISV_022739 [Vitis vinifera]
          Length = 1318

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/100 (50%), Positives = 67/100 (67%)
 Frame = -3

Query: 356  SRKSVKNHLIDIMCHIICIEDHLQGLLLGPWLNPAYSLLWRKSVLGAPDIASVKXXXXXX 177
            S+K+ K HL+D++ +I+ IE  L+GLL+GPW+NP ++ LW K+ L A D+ASVK      
Sbjct: 993  SKKNRKGHLVDVINYILSIEVRLRGLLMGPWMNPHHAKLWCKNALKASDVASVKHLLLTL 1052

Query: 176  XXXXXXXXLSADWRKHVDSVATMGSASHIVSNSARASSNM 57
                    LSADW K +DS  TMGSASHIV  S+RASS +
Sbjct: 1053 ESNLRRLALSADWLKQMDSFITMGSASHIVI-SSRASSKL 1091


Top