BLASTX nr result

ID: Scutellaria24_contig00013046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00013046
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306436.1| glutamate-gated kainate-type ion channel rec...    79   3e-13
ref|XP_003527293.1| PREDICTED: glutamate receptor 3.3-like [Glyc...    79   5e-13
ref|XP_003533408.1| PREDICTED: glutamate receptor 3.3-like [Glyc...    77   2e-12
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...    75   4e-12
emb|CBI37733.3| unnamed protein product [Vitis vinifera]               74   2e-11

>ref|XP_002306436.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222855885|gb|EEE93432.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 937

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
 Frame = +2

Query: 2    IHDKWLIDVRASSCSATPTSVESEQLDLKSFWALFLISGIACFLALLLYLCSMVYKFKRR 181
            IHDKWL+    S+CS+     E ++LDL+SFW L+LI GIAC LAL LY   MV +F R 
Sbjct: 807  IHDKWLM---RSACSSQGAKFEVDRLDLRSFWGLYLICGIACLLALFLYFLKMVRQFSRH 863

Query: 182  LHSR---SGQPTTNIPVRIQNFIMFMDTKE*EQTTKWRK 289
              S    SG+ +T+   R+Q F+ F+D KE E  ++ ++
Sbjct: 864  YSSELDSSGRGSTS--ARLQTFLSFVDEKEQEVKSRSKR 900


>ref|XP_003527293.1| PREDICTED: glutamate receptor 3.3-like [Glycine max]
          Length = 929

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/98 (39%), Positives = 57/98 (58%)
 Frame = +2

Query: 2    IHDKWLIDVRASSCSATPTSVESEQLDLKSFWALFLISGIACFLALLLYLCSMVYKFKRR 181
            IHDKW+     SSCS     ++S++L LKSFW LFLI GIACF+AL+L+   ++++ ++ 
Sbjct: 806  IHDKWMT---RSSCSLENAEIDSDRLQLKSFWGLFLICGIACFIALVLHFLQLMFQLRQS 862

Query: 182  LHSRSGQPTTNIPVRIQNFIMFMDTKE*EQTTKWRKAN 295
              S      ++I  R   F+  +D KE     K RK N
Sbjct: 863  PPSEPASSASSISGRFHRFLTLIDEKEDPSKRKGRKRN 900


>ref|XP_003533408.1| PREDICTED: glutamate receptor 3.3-like [Glycine max]
          Length = 930

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/99 (40%), Positives = 63/99 (63%)
 Frame = +2

Query: 2    IHDKWLIDVRASSCSATPTSVESEQLDLKSFWALFLISGIACFLALLLYLCSMVYKFKRR 181
            IHDKWL     S+CS+       ++L+LKSFW LFL+SGIACF+ALL Y+  M Y+F R 
Sbjct: 804  IHDKWLT---RSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALLCYVIRMAYRFSRD 860

Query: 182  LHSRSGQPTTNIPVRIQNFIMFMDTKE*EQTTKWRKANK 298
             +S + +  +++  R+++F+ F++ +E E    W K  +
Sbjct: 861  SNSNNIE-CSSLSARLRSFLSFVNEREGEDKC-WPKTRR 897


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    IHDKWLIDVRASSCSATPTSVESEQLDLKSFWALFLISGIACFLALLLYLCSMVYKFKRR 181
            IHDKWL       CS+  +   SEQL L+SFW LFLI GIACFLAL +Y C M+ +F R 
Sbjct: 793  IHDKWLA---RKVCSSQISDSGSEQLQLQSFWGLFLICGIACFLALFIYFCMMLRQFSRH 849

Query: 182  LHSRSGQP-TTNIPVRIQNFIMFMDTKE*EQTTKWRK 289
                S     ++   RIQ F+ F+D K  E  +K ++
Sbjct: 850  APEDSDPSIRSSRSRRIQTFLSFVDEKADESKSKSKR 886


>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2    IHDKWLIDVRASSCSATPTSVESEQLDLKSFWALFLISGIACFLALLLYLCSMVYKFKRR 181
            IHDKWL   +   CS   + + S+QL  +SFW LFLI GIACFLALL+Y C MV +F ++
Sbjct: 1023 IHDKWL---KNKVCSDN-SQLGSDQLQFQSFWGLFLICGIACFLALLVYFCMMVRQFSKQ 1078

Query: 182  LHSRS-GQPTTNIPVRIQNFIMFMDTK 259
                S     +++  R+Q F+ F+D K
Sbjct: 1079 FSEASPSSHGSSLSARLQTFLSFVDNK 1105


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