BLASTX nr result

ID: Scutellaria24_contig00012943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012943
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314899.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-30
ref|XP_002280593.1| PREDICTED: mitochondrial protein import prot...   138   4e-30
tpg|DAA58878.1| TPA: etched1 [Zea mays]                               124   7e-26
ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038....   123   1e-25
ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG...   123   1e-25

>ref|XP_002314899.1| predicted protein [Populus trichocarpa] gi|222863939|gb|EEF01070.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  139 bits (349), Expect = 2e-30
 Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 4/162 (2%)
 Frame = +1

Query: 109 SLCSTTNTHINIKPSFSSLPCSQLLRPNVALRRADFAL--PRLRISNRRNTGVEQRFRAP 282
           S CS   T   +KP+    P   LL PN + +   F+   PRLRIS+      ++  R  
Sbjct: 9   SQCSFLPTLTCMKPNPKRKPIYPLLFPN-SYKPISFSTTNPRLRISHTEAILPKRSRRLF 67

Query: 283 RISCL--SNDECKETESVSEDSQQEASIDLKLPRRSLLVTFTCDACGVRSQRLINRLAYE 456
            +S L   N E       ++ +++ A+ID+KLPRRSLLV FTC+ CG RSQRLINRLAYE
Sbjct: 68  VVSGLVDGNSETYPEVESNDLNEESATIDIKLPRRSLLVQFTCNECGERSQRLINRLAYE 127

Query: 457 RGLVYVQCSGCSQYHKLVDNLGLVIEYNLQEEIHSDANMDQV 582
           RGLV+VQC+GC +YHKL DNLGL++EY+L+EEI +++N DQV
Sbjct: 128 RGLVFVQCAGCERYHKLADNLGLIVEYDLREEISAESNADQV 169


>ref|XP_002280593.1| PREDICTED: mitochondrial protein import protein ZIM17 [Vitis
           vinifera] gi|297737905|emb|CBI27106.3| unnamed protein
           product [Vitis vinifera]
          Length = 173

 Score =  138 bits (347), Expect = 4e-30
 Identities = 79/164 (48%), Positives = 99/164 (60%), Gaps = 19/164 (11%)
 Frame = +1

Query: 148 PSFSSLPCS------QLLRPNVALRRADFALPRLRISNRRNTGVEQRFRAPRISCL---- 297
           P+ SSL  S      +L  P+    R      RLR+S       +  FR    S      
Sbjct: 10  PTISSLHSSFTTTTLELPAPSTVFFRPKTRFSRLRVSPTTTVAPKYGFRVLAASGFRDGN 69

Query: 298 ---------SNDECKETESVSEDSQQEASIDLKLPRRSLLVTFTCDACGVRSQRLINRLA 450
                    S      + SVS+DS  EASID+KLPRRSL+V FTCDACG R++RLINRLA
Sbjct: 70  SEANLELGPSVSSSSHSNSVSDDSCSEASIDIKLPRRSLIVQFTCDACGERTERLINRLA 129

Query: 451 YERGLVYVQCSGCSQYHKLVDNLGLVIEYNLQEEIHSDANMDQV 582
           +ERG V+VQC+GC Q+HKLVDNLGLV+EY+L+E I +D+N DQV
Sbjct: 130 FERGTVFVQCAGCLQHHKLVDNLGLVVEYDLRENISADSNTDQV 173


>tpg|DAA58878.1| TPA: etched1 [Zea mays]
          Length = 166

 Score =  124 bits (310), Expect = 7e-26
 Identities = 63/110 (57%), Positives = 78/110 (70%)
 Frame = +1

Query: 223 PRLRISNRRNTGVEQRFRAPRISCLSNDECKETESVSEDSQQEASIDLKLPRRSLLVTFT 402
           PRLR+SNR           PR   +S     E  S +  S  EA+ID+KLPRRSLLV FT
Sbjct: 53  PRLRVSNR-----------PRRLIVSASSSGEANSDAAPSPTEAAIDIKLPRRSLLVQFT 101

Query: 403 CDACGVRSQRLINRLAYERGLVYVQCSGCSQYHKLVDNLGLVIEYNLQEE 552
           C+ACG R++RLINR+AYERG V++QC+GC  YHK VDNLGLV+EY+L+EE
Sbjct: 102 CNACGERTKRLINRVAYERGTVFLQCAGCQVYHKFVDNLGLVVEYDLREE 151


>ref|NP_001105722.1| etched1 [Zea mays] gi|48596291|emb|CAD45038.1| ETCHED1 protein [Zea
           mays] gi|48596293|emb|CAD45039.1| ETCHED1 protein [Zea
           mays]
          Length = 163

 Score =  123 bits (309), Expect = 1e-25
 Identities = 63/110 (57%), Positives = 78/110 (70%)
 Frame = +1

Query: 223 PRLRISNRRNTGVEQRFRAPRISCLSNDECKETESVSEDSQQEASIDLKLPRRSLLVTFT 402
           PRLR+SNR           PR   +S     E  S +  S  EA+ID+KLPRRSLLV FT
Sbjct: 50  PRLRVSNR-----------PRRLIVSASSSGEANSDAVPSPTEAAIDIKLPRRSLLVQFT 98

Query: 403 CDACGVRSQRLINRLAYERGLVYVQCSGCSQYHKLVDNLGLVIEYNLQEE 552
           C+ACG R++RLINR+AYERG V++QC+GC  YHK VDNLGLV+EY+L+EE
Sbjct: 99  CNACGERTKRLINRVAYERGTVFLQCAGCQVYHKFVDNLGLVVEYDLREE 148


>ref|NP_001150527.1| zinc ribbon 1 [Zea mays] gi|195639902|gb|ACG39419.1| zinc ribbon 1
           [Zea mays]
          Length = 161

 Score =  123 bits (309), Expect = 1e-25
 Identities = 63/110 (57%), Positives = 78/110 (70%)
 Frame = +1

Query: 223 PRLRISNRRNTGVEQRFRAPRISCLSNDECKETESVSEDSQQEASIDLKLPRRSLLVTFT 402
           PRLR+SNR           PR   +S     E  S +  S  EA+ID+KLPRRSLLV FT
Sbjct: 48  PRLRVSNR-----------PRRLIVSASSSGEANSDAVPSPAEAAIDIKLPRRSLLVQFT 96

Query: 403 CDACGVRSQRLINRLAYERGLVYVQCSGCSQYHKLVDNLGLVIEYNLQEE 552
           C+ACG R++RLINR+AYERG V++QC+GC  YHK VDNLGLV+EY+L+EE
Sbjct: 97  CNACGERTKRLINRVAYERGTVFLQCAGCQVYHKFVDNLGLVVEYDLREE 146


Top