BLASTX nr result

ID: Scutellaria24_contig00012863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012863
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis tha...    57   1e-06
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...    57   2e-06

>ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis thaliana]
            gi|5281022|emb|CAB45995.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268337|emb|CAB78631.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658263|gb|AEE83663.1| condensin-2 complex subunit
            D3 [Arabidopsis thaliana]
          Length = 1314

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = +3

Query: 78   RSVLRDVNNGGSTP-LSTMNVPKLKTRTAEVGKSAGRPSSEVISSVRRRQCFDSDDE 245
            RSVLR+VN G +TP LS M+VPKL  R++     +GRPS++V+ S+RRR  F SDDE
Sbjct: 1259 RSVLREVNGGAATPPLSAMSVPKL--RSSRGVSQSGRPSADVLESLRRRPTFMSDDE 1313


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1315

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +3

Query: 78   RSVLRDVNNGGSTP-LSTMNVPKLKTRTAEVGKSAGRPSSEVISSVRRRQCFDSDDE 245
            RSVLR+VN G +TP LS M+VPKL  R +     +GRPS++V+ S+RRR  F SDDE
Sbjct: 1260 RSVLREVNGGAATPPLSAMSVPKL--RLSRGVSQSGRPSADVLESLRRRPTFMSDDE 1314


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