BLASTX nr result

ID: Scutellaria24_contig00012862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012862
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin...   128   5e-28
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]   128   5e-28
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   124   8e-27
ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...   116   2e-24

>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1065

 Score =  128 bits (321), Expect = 5e-28
 Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 LPGLGLGSKQKSLAEIFQDDMNRASPVPGHPSRPASRNAFDETGS-MGSAEAELALLRRD 125
           L GLGLGSKQKSLAEIFQDD+ R +PV GHPSRPASRNAFDE    +GS EAEL  LRR+
Sbjct: 191 LSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSVEAELGHLRRE 250

Query: 124 MASSDSIHSNQNIQASSGAQLTGPPTSFSYAAVLGASLSRS 2
           + S+D + S  ++Q SS  Q  G PTS++YA+VLG SLSRS
Sbjct: 251 LKSADVLRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRS 291


>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
          Length = 1039

 Score =  128 bits (321), Expect = 5e-28
 Identities = 66/101 (65%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 LPGLGLGSKQKSLAEIFQDDMNRASPVPGHPSRPASRNAFDETGS-MGSAEAELALLRRD 125
           L GLGLGSKQKSLAEIFQDD+ R +PV GHPSRPASRNAFDE    +GS EAEL  LRR+
Sbjct: 165 LSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSVEAELGHLRRE 224

Query: 124 MASSDSIHSNQNIQASSGAQLTGPPTSFSYAAVLGASLSRS 2
           + S+D + S  ++Q SS  Q  G PTS++YA+VLG SLSRS
Sbjct: 225 LKSADVLRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRS 265


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/101 (65%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 LPGLGLGSKQKSLAEIFQDDMNRASPVPGHPSRPASRNAFDETGS-MGSAEAELALLRRD 125
           LPGLGLGSKQKSLAEIFQDD+   + V G PSRPASRNAFDE G  + S E+ELA LRRD
Sbjct: 199 LPGLGLGSKQKSLAEIFQDDLGLNASVTGFPSRPASRNAFDENGDIISSVESELAHLRRD 258

Query: 124 MASSDSIHSNQNIQASSGAQLTGPPTSFSYAAVLGASLSRS 2
             ++D++ S  N+  SS AQ TGP  S+SYAA LG+SLSRS
Sbjct: 259 SLATDTLRSVSNVPVSSAAQNTGPQASYSYAAALGSSLSRS 299


>ref|XP_002299859.1| predicted protein [Populus trichocarpa] gi|222847117|gb|EEE84664.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  122 bits (307), Expect = 2e-26
 Identities = 68/101 (67%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 LPGLGLGSKQKSLAEIFQDDMNRASPVPGHPSRPASRNAFDE-TGSMGSAEAELALLRRD 125
           LPGLGL SKQKS AEIFQDD+ RA+PV G PSRPASRNAF+E   ++GSAEAELA LRR+
Sbjct: 194 LPGLGLASKQKSFAEIFQDDLGRATPVTGPPSRPASRNAFNENVETLGSAEAELAHLRRE 253

Query: 124 MASSDSIHSNQNIQASSGAQLTGPPTSFSYAAVLGASLSRS 2
           ++S+D++ S  N Q SS  Q  G P S+SYAA LGASLSRS
Sbjct: 254 LSSADTLRSGANGQGSSPVQNIGQP-SYSYAAALGASLSRS 293


>ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
           sativus]
          Length = 1043

 Score =  116 bits (290), Expect = 2e-24
 Identities = 61/100 (61%), Positives = 73/100 (73%)
 Frame = -3

Query: 301 LPGLGLGSKQKSLAEIFQDDMNRASPVPGHPSRPASRNAFDETGSMGSAEAELALLRRDM 122
           LPGLGLG+KQKSLAEIFQDDM R +PV G PSRPASRNAFD+      A  ELA LR D+
Sbjct: 185 LPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPASRNAFDDNVETMGATDELANLRHDL 244

Query: 121 ASSDSIHSNQNIQASSGAQLTGPPTSFSYAAVLGASLSRS 2
             S+ + +  N Q+SS  Q  G P+S++YAA +GASLSRS
Sbjct: 245 MISEVMRTGANGQSSSAGQSIGAPSSYTYAAAVGASLSRS 284


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