BLASTX nr result

ID: Scutellaria24_contig00012711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012711
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_003516385.1| PREDICTED: ninja-family protein AFP2-like [G...   103   1e-20
ref|XP_003520115.1| PREDICTED: ninja-family protein AFP2-like [G...   100   9e-20
ref|XP_002312284.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...    99   4e-19

>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/108 (56%), Positives = 77/108 (71%), Gaps = 21/108 (19%)
 Frame = -3

Query: 262 LQGSS--GEL-SPAS-------IGNQDIGSSTTK-------ASKPDMDSLSRRAP----R 146
           +QGSS  GE  SPAS          + +GSS TK       AS+ + ++LS++      R
Sbjct: 194 VQGSSSGGEARSPASNQSLQERSSQEAVGSSGTKKIENACRASRTEPENLSKKLDSAENR 253

Query: 145 GKDMGTNSLEDMPCVFTKGDGPNGRRVDGILYKYGKGEDVRIMCICHG 2
           G+++GTN++EDMPCVFTKGDGPNGRRVDGILYKYGKGE+VRIMC+CHG
Sbjct: 254 GREIGTNAMEDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCVCHG 301


>ref|XP_003516385.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 407

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
 Frame = -3

Query: 235 PASIGNQDIGSSTTKASKPDMDSLSRRAP-----RGKDMGTNSLEDMPCVFTKGDGPNGR 71
           PA  G + +  + T+ SK + ++ SR+        G+ +GTNS+EDMPCVFTKGDGPNGR
Sbjct: 293 PAGSGGK-MNENVTRTSKAEAENPSRKPHPAQKITGRHIGTNSMEDMPCVFTKGDGPNGR 351

Query: 70  RVDGILYKYGKGEDVRIMCICHG 2
           R++GILYKYGKGE+VRIMC+CHG
Sbjct: 352 RIEGILYKYGKGEEVRIMCVCHG 374


>ref|XP_003520115.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 411

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/84 (58%), Positives = 62/84 (73%), Gaps = 6/84 (7%)
 Frame = -3

Query: 235 PASIGNQDIGSSTTKASKPDM-DSLSRR-----APRGKDMGTNSLEDMPCVFTKGDGPNG 74
           PA  G +    + T+ SK D  ++ SR+        G+ +GTNS+EDMPCVFTKGDGPNG
Sbjct: 296 PAGSGGKT-NENVTRTSKADQGENPSRKHHPSQKTMGRHIGTNSMEDMPCVFTKGDGPNG 354

Query: 73  RRVDGILYKYGKGEDVRIMCICHG 2
           RR++GILYKYGKGE+VRIMC+CHG
Sbjct: 355 RRIEGILYKYGKGEEVRIMCVCHG 378


>ref|XP_002312284.1| predicted protein [Populus trichocarpa] gi|222852104|gb|EEE89651.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  100 bits (250), Expect = 9e-20
 Identities = 41/48 (85%), Positives = 48/48 (100%)
 Frame = -3

Query: 145 GKDMGTNSLEDMPCVFTKGDGPNGRRVDGILYKYGKGEDVRIMCICHG 2
           G+++GTN++EDMPCVFTKGDGPNGRRVDGILYKYGKGE+VRIMC+CHG
Sbjct: 15  GREIGTNAMEDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCVCHG 62


>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
           gi|223549250|gb|EEF50739.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 355

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 17/101 (16%)
 Frame = -3

Query: 253 SSGEL-SPAS-------IGNQDIGSSTTKASK-----PDMDSLSRRAP----RGKDMGTN 125
           S GE  SPAS       I  + +GSS +K ++       M++ SR+      RG+++G N
Sbjct: 222 SGGEARSPASNQSLQDRINQEAVGSSRSKTNENINRTSSMENPSRKLESAEIRGREIGMN 281

Query: 124 SLEDMPCVFTKGDGPNGRRVDGILYKYGKGEDVRIMCICHG 2
            +EDMPCVFT GDGPNGR+V+GILYKYGKGE+VRIMC+CHG
Sbjct: 282 PMEDMPCVFTIGDGPNGRKVEGILYKYGKGEEVRIMCVCHG 322


Top