BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012688
         (1712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   652   0.0  
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   631   e-178
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor...   625   e-176
ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [...   624   e-176
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   624   e-176

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  652 bits (1681), Expect = 0.0
 Identities = 328/465 (70%), Positives = 368/465 (79%), Gaps = 1/465 (0%)
 Frame = -3

Query: 1569 VSSLL-STCTFHRSFFSPIHLARALASTNSSFKHIHKHLCYNAVTRNLSCKSTVSADFST 1393
            VSSL  S C   RSF +P+ LAR LAS+N  F   HK + +   + N +C   ++A  S+
Sbjct: 15   VSSLWNSNC---RSFGTPVALARTLASSNV-FSRRHKRVVW--CSNNPTCTRELTA--SS 66

Query: 1392 KLXXXXXXXXXXXYGRLLPCPSQNGPPRVEHLVVLEGGPVLEYISNALDLPPLFVADLIH 1213
                         Y RLLPCPSQNGPPRVEHLVV EGG VL+YIS ALDLPPLFVADLIH
Sbjct: 67   DSANTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIH 126

Query: 1212 FGAVFYALVCPDPPPSATPEQIKVFKEYTEPSILRKRSSIKGKTFREAQKTFRITQSDEF 1033
            FGAV+YALVCP+PPPSATPEQ+++FKE T PS+LRKR SIKGKT REAQKTFRIT  +EF
Sbjct: 127  FGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEF 186

Query: 1032 VEAGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATF 853
            VEAGTYLRVHVHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATF
Sbjct: 187  VEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATF 246

Query: 852  ASRALGLEDPLKTTHQIDNCTEGCVVFARTKEYCSVFHAKIREXXXXXXXXXXXXXXXXX 673
            A+RALGL  PL+TTHQIDNCTEGCVV ARTKEYCSVFH KIRE                 
Sbjct: 247  ATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPI 306

Query: 672  XLITHYMRTVNIAPRLISGDCINGWHLCQLEVLDCRKVPWPNNLTEEKYGIEDCGWPSKE 493
             ++THYMR VNIAPRLIS D I GW+LCQLEVL+C++VPWP+ L EEKY IED GWP K 
Sbjct: 307  GIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKN 366

Query: 492  FAYECTINLLTGRTHQIRTQLAACGAPLVGDSMYMPAAIAEANQPGINPFGKNKKEYTSD 313
             A++C INLLTGRTHQIR QLAACGAP+VGDSMYMPAAIAE   PG+NPFGK KK+YT++
Sbjct: 367  SAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTE 426

Query: 312  DAKALAVEEWIAHHGKEPSIAIGLQAYRISWDDGEHTYEAGVPWW 178
            + +  AV EWIA HGKEP +AIGLQA +ISWDDGEH Y+AG PWW
Sbjct: 427  NDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  631 bits (1627), Expect = e-178
 Identities = 306/461 (66%), Positives = 357/461 (77%), Gaps = 6/461 (1%)
 Frame = -3

Query: 1539 HRSFFSPIHLARALASTNSSFKHIHK------HLCYNAVTRNLSCKSTVSADFSTKLXXX 1378
            +RSF +P+ + R LAST++   H H           N+  R   C+S+      T     
Sbjct: 14   YRSFVTPVTVLRTLASTHAYSFHRHHPKNALARFSLNSHERKFCCESSKPEVAYTT--NT 71

Query: 1377 XXXXXXXXYGRLLPCPSQNGPPRVEHLVVLEGGPVLEYISNALDLPPLFVADLIHFGAVF 1198
                    Y RLLPCPS N PPR+EHLVVLE GPVL+YI  ALDLPPLFVADLI FGAV 
Sbjct: 72   SCVNGNSDYDRLLPCPSYNRPPRIEHLVVLEEGPVLDYICKALDLPPLFVADLIDFGAVH 131

Query: 1197 YALVCPDPPPSATPEQIKVFKEYTEPSILRKRSSIKGKTFREAQKTFRITQSDEFVEAGT 1018
            YALVCP PP +ATPEQI++F+++T PS+L+KRSSIKGKT REAQKTFRIT  D+++EAGT
Sbjct: 132  YALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGT 191

Query: 1017 YLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRAL 838
            YLRVHVHPKRFPRCY+IDW+SRIIAVT+ YVVLDKPAGTSVGGT DNIEESCATFA+RAL
Sbjct: 192  YLRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRAL 251

Query: 837  GLEDPLKTTHQIDNCTEGCVVFARTKEYCSVFHAKIREXXXXXXXXXXXXXXXXXXLITH 658
            GL  PLKTTHQIDNCTEGCVV AR+KEYCSVFH KIRE                  +I +
Sbjct: 252  GLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKN 311

Query: 657  YMRTVNIAPRLISGDCINGWHLCQLEVLDCRKVPWPNNLTEEKYGIEDCGWPSKEFAYEC 478
            YMR VNIAPRL+S + +NGWHLCQLEVL+CRKVPWP+   EEKY +EDCGWPSK+FAYEC
Sbjct: 312  YMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYEC 371

Query: 477  TINLLTGRTHQIRTQLAACGAPLVGDSMYMPAAIAEANQPGINPFGKNKKEYTSDDAKAL 298
             INLLTGRTHQIR QLAA GAPLVGDSMYMPAA+AE   PG+NPFGK++K+YT++  +++
Sbjct: 372  KINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDESM 431

Query: 297  AVEEWIAHHGKEPSIAIGLQAYRISWDDGEHTYEAGVPWWR 175
            AV EW+A HGKEP +AIGLQA  ISWD+G+H Y+AG PWWR
Sbjct: 432  AVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
            sativus]
          Length = 475

 Score =  625 bits (1612), Expect = e-176
 Identities = 305/454 (67%), Positives = 349/454 (76%)
 Frame = -3

Query: 1536 RSFFSPIHLARALASTNSSFKHIHKHLCYNAVTRNLSCKSTVSADFSTKLXXXXXXXXXX 1357
            R +F+P    R+L S +S+F                 CKS+++ D + K           
Sbjct: 38   RDYFAP---RRSLGSKSSAFP----------------CKSSIT-DVTVKTATNSAENGYP 77

Query: 1356 XYGRLLPCPSQNGPPRVEHLVVLEGGPVLEYISNALDLPPLFVADLIHFGAVFYALVCPD 1177
             Y RLLPCPS + PPRVEH+VVLE GPV+EYI  +L+LPPL+VADLIHFGAV+YALVCP 
Sbjct: 78   QYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVCPQ 137

Query: 1176 PPPSATPEQIKVFKEYTEPSILRKRSSIKGKTFREAQKTFRITQSDEFVEAGTYLRVHVH 997
            PP +ATPEQI++FK++TEPS L+ R SIKGKT REAQKTFRIT  DEFVE GTYLRVHVH
Sbjct: 138  PPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVH 197

Query: 996  PKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLEDPLK 817
            PKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFA+RALGL  PL 
Sbjct: 198  PKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLW 257

Query: 816  TTHQIDNCTEGCVVFARTKEYCSVFHAKIREXXXXXXXXXXXXXXXXXXLITHYMRTVNI 637
            TTHQIDNCTEGCV+FARTKEYCS+FH KIRE                  +ITHYMR +NI
Sbjct: 258  TTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPINI 317

Query: 636  APRLISGDCINGWHLCQLEVLDCRKVPWPNNLTEEKYGIEDCGWPSKEFAYECTINLLTG 457
            APRL+S DCI+GW +CQLEVL+CR+V WP+   E KY +EDCGWPSK+ AYEC INLLTG
Sbjct: 318  APRLVSKDCIDGWIICQLEVLECREVSWPDADIEAKYRVEDCGWPSKKKAYECRINLLTG 377

Query: 456  RTHQIRTQLAACGAPLVGDSMYMPAAIAEANQPGINPFGKNKKEYTSDDAKALAVEEWIA 277
            RTHQIR QLA CGAPLVGDSMYMPA +AE   PG+NPFGK KKEYT+++ K  AV EW A
Sbjct: 378  RTHQIRAQLADCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETAVAEWSA 437

Query: 276  HHGKEPSIAIGLQAYRISWDDGEHTYEAGVPWWR 175
             HGKEP++AIGLQAY ISWD  EH+Y AG PWWR
Sbjct: 438  LHGKEPAVAIGLQAYEISWDSREHSYNAGTPWWR 471


>ref|XP_002518514.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542359|gb|EEF43901.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 395

 Score =  624 bits (1610), Expect = e-176
 Identities = 291/391 (74%), Positives = 330/391 (84%)
 Frame = -3

Query: 1347 RLLPCPSQNGPPRVEHLVVLEGGPVLEYISNALDLPPLFVADLIHFGAVFYALVCPDPPP 1168
            RLLPCPSQN PPRVEHLVVLE GPVL+YI  ALDLPPLFVADLIHFGAV YALVCP PPP
Sbjct: 5    RLLPCPSQNRPPRVEHLVVLEEGPVLDYICKALDLPPLFVADLIHFGAVHYALVCPQPPP 64

Query: 1167 SATPEQIKVFKEYTEPSILRKRSSIKGKTFREAQKTFRITQSDEFVEAGTYLRVHVHPKR 988
            +ATPEQI++F+E+T PS+L+KR+SIKGKT REAQKTFR++   +F+E GTYLRV+VHP+R
Sbjct: 65   TATPEQIRLFEEFTAPSVLKKRASIKGKTVREAQKTFRVSSVHQFLEVGTYLRVYVHPRR 124

Query: 987  FPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLEDPLKTTH 808
            FPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTT+NIEE+CATFA+RALGL  PLKTTH
Sbjct: 125  FPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTNNIEETCATFATRALGLTIPLKTTH 184

Query: 807  QIDNCTEGCVVFARTKEYCSVFHAKIREXXXXXXXXXXXXXXXXXXLITHYMRTVNIAPR 628
            QIDNCTEGCVV ART EYC VFH KIRE                  +ITHYMR  NI PR
Sbjct: 185  QIDNCTEGCVVLARTNEYCPVFHGKIRENKVKKLYLALAACPVPVGVITHYMRPGNIPPR 244

Query: 627  LISGDCINGWHLCQLEVLDCRKVPWPNNLTEEKYGIEDCGWPSKEFAYECTINLLTGRTH 448
            L+S + I GW+LCQLEVL+CRKVPWP+ +TEEKY +EDCGWPSK+FAYEC INLLTGRTH
Sbjct: 245  LVSEEFIEGWYLCQLEVLECRKVPWPDTVTEEKYSVEDCGWPSKDFAYECKINLLTGRTH 304

Query: 447  QIRTQLAACGAPLVGDSMYMPAAIAEANQPGINPFGKNKKEYTSDDAKALAVEEWIAHHG 268
            QIR QLAACGAPLVGDSMYMPAAIAE   PG+NPFGK+KK+YT ++ +++ V EW+  HG
Sbjct: 305  QIRAQLAACGAPLVGDSMYMPAAIAEMANPGVNPFGKHKKQYTGENDESMGVAEWVERHG 364

Query: 267  KEPSIAIGLQAYRISWDDGEHTYEAGVPWWR 175
            KEPSIAIGLQA  ISW D +H Y+AG PWWR
Sbjct: 365  KEPSIAIGLQACEISWGDSKHIYKAGPPWWR 395


>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
            chloroplastic-like [Cucumis sativus]
          Length = 475

 Score =  624 bits (1608), Expect = e-176
 Identities = 302/444 (68%), Positives = 342/444 (77%)
 Frame = -3

Query: 1506 RALASTNSSFKHIHKHLCYNAVTRNLSCKSTVSADFSTKLXXXXXXXXXXXYGRLLPCPS 1327
            RA  S  SS  +        + +    CKS+++ D + K            Y RLLPCPS
Sbjct: 29   RASLSAASSRDYFAPRCSLGSKSSAFPCKSSIT-DVTVKTATNSAENGYPQYHRLLPCPS 87

Query: 1326 QNGPPRVEHLVVLEGGPVLEYISNALDLPPLFVADLIHFGAVFYALVCPDPPPSATPEQI 1147
             + PPRVEH+VVLE GPV+EYI  +L+LPPL+VADLIHFGAV+YALVCP PP +ATPEQI
Sbjct: 88   FSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVCPQPPKTATPEQI 147

Query: 1146 KVFKEYTEPSILRKRSSIKGKTFREAQKTFRITQSDEFVEAGTYLRVHVHPKRFPRCYEI 967
            ++FK  TEPS L+ R SIKGKT REAQKTFRIT  DEFVE GTYLRVHVHPKRFPRCYEI
Sbjct: 148  RLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVHVHPKRFPRCYEI 207

Query: 966  DWRSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFASRALGLEDPLKTTHQIDNCTE 787
            DW+SRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFA+RALGL  PL TTHQIDNCTE
Sbjct: 208  DWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTSPLWTTHQIDNCTE 267

Query: 786  GCVVFARTKEYCSVFHAKIREXXXXXXXXXXXXXXXXXXLITHYMRTVNIAPRLISGDCI 607
            GCV+FARTKEYCS+FH KIRE                  +ITHYMR +NIAPRL+S DCI
Sbjct: 268  GCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMRPINIAPRLVSKDCI 327

Query: 606  NGWHLCQLEVLDCRKVPWPNNLTEEKYGIEDCGWPSKEFAYECTINLLTGRTHQIRTQLA 427
            +GW +CQLEVL+CR+V WP+  TE KY +EDCGWPSK+ AYEC INLLTGRTHQIR QLA
Sbjct: 328  DGWIICQLEVLECREVSWPDADTEAKYRVEDCGWPSKKKAYECRINLLTGRTHQIRAQLA 387

Query: 426  ACGAPLVGDSMYMPAAIAEANQPGINPFGKNKKEYTSDDAKALAVEEWIAHHGKEPSIAI 247
             CGAPLVGDSMYMPA +AE   PG+NPFGK KKEYT+++ K  +V EW A HGKEP++AI
Sbjct: 388  DCGAPLVGDSMYMPAVVAEMGSPGLNPFGKCKKEYTNEEDKETSVAEWSALHGKEPAVAI 447

Query: 246  GLQAYRISWDDGEHTYEAGVPWWR 175
            GLQAY ISWD  EH Y AG PWWR
Sbjct: 448  GLQAYEISWDSREHIYNAGTPWWR 471