BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012571
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...   205   3e-51
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   201   7e-50
ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ...   196   2e-48
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   191   5e-47
ref|NP_195434.1| pentatricopeptide repeat-containing protein [Ar...   189   3e-46

>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/124 (77%), Positives = 110/124 (88%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           FDP SFAAS LVHMY KCG+I+ A RVF  +PRPDLVSWTSLI+GYAQNGQP EAL+ F+
Sbjct: 354 FDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFE 413

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIKEKYGLSLTADHYACVVDLLSRS 361
           LL +SGTQPDH+TF+GVLSACTHAGLVDKGLEYF  IKEK+GL+ TADHYAC++DLLSRS
Sbjct: 414 LLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRS 473

Query: 362 GRFR 373
           GR +
Sbjct: 474 GRLQ 477



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/73 (46%), Positives = 44/73 (60%)
 Frame = +2

Query: 26  SALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFDLLCRSGTQ 205
           SAL  MY KCGSI  A  +F      D+VSWT++I+ Y + G+  E   LF  L +SG  
Sbjct: 261 SALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIW 320

Query: 206 PDHVTFIGVLSAC 244
           P+  TF GVL+AC
Sbjct: 321 PNEFTFSGVLNAC 333



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/94 (32%), Positives = 50/94 (53%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           F P    ++ ++ MY KC S+  A R+F  +   DL SW  +I+GYA+ G+  EA KLFD
Sbjct: 120 FVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFD 179

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYF 283
            +    T+ D+ ++  + S        ++ LE F
Sbjct: 180 QM----TERDNFSWTAMTSGYVRHDQHEEALELF 209


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/123 (73%), Positives = 110/123 (89%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           FDP+SFAASALVHMY+KCG++  A RVFK  P+PDL SWTSLI GYAQNGQP EA++ F+
Sbjct: 335 FDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFE 394

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIKEKYGLSLTADHYACVVDLLSRS 361
           LL +SGTQPDH+TF+GVLSAC HAGLVDKGL+YF+ IKE+YGL+ TADHYAC++DLL+RS
Sbjct: 395 LLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARS 454

Query: 362 GRF 370
           G+F
Sbjct: 455 GQF 457



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/75 (48%), Positives = 49/75 (65%)
 Frame = +2

Query: 26  SALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFDLLCRSGTQ 205
           SAL  MY KCGSIE A  +F  +   D+V+WT++I+ Y Q+G+  E   LF  L RSG +
Sbjct: 242 SALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIR 301

Query: 206 PDHVTFIGVLSACTH 250
           P+  TF GVL+AC +
Sbjct: 302 PNEFTFSGVLNACAN 316



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/98 (33%), Positives = 53/98 (54%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           F P  F  + L+ MYAKC S+  + ++F  +P  DL SW  LI+GYA+ G   EA  LFD
Sbjct: 101 FVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFD 160

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIK 295
            +     + D+ ++  ++S        ++ LE F ++K
Sbjct: 161 KM----PERDNFSWTAMISGYVRHDRPNEALELFRMMK 194


>ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512262|gb|AES93885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  196 bits (497), Expect = 2e-48
 Identities = 91/124 (73%), Positives = 108/124 (87%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           +DP+SFAASALVH+Y+KCG+ E A RVF  +PRPDLVSWTSLI GYAQNGQP  AL+ F+
Sbjct: 328 YDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFE 387

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIKEKYGLSLTADHYACVVDLLSRS 361
            L RSGT+PD +TF+GVLSACTHAGLVD GLEYF+ +KEK+GL  TADHYACV+DLL+RS
Sbjct: 388 SLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARS 447

Query: 362 GRFR 373
           GRF+
Sbjct: 448 GRFK 451



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = +2

Query: 26  SALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFDLLCRSGTQ 205
           +AL+ +Y KCGS+  A  +F  +   D+VSWT++I+   ++G+  E   LF  L  SG +
Sbjct: 235 TALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVR 294

Query: 206 PDHVTFIGVLSACTHAGLVDKGLE 277
           P+  TF GVL+AC        G E
Sbjct: 295 PNEYTFAGVLNACADLAAEQMGKE 318



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/99 (35%), Positives = 57/99 (57%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           F P    ++ L+HMYAKCGS+  A  +F  +P+ DL SW ++I+GYA  G+  +A KLFD
Sbjct: 94  FIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFD 153

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIKE 298
            +       D+ ++  V+S     G   + L+ F +++E
Sbjct: 154 EM----PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQE 188


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/124 (73%), Positives = 106/124 (85%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           +DP SFA SALVHMY+KCG+   A RVF  + +PDLVSWTSLI GYAQNGQP EAL  F+
Sbjct: 352 YDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFE 411

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIKEKYGLSLTADHYACVVDLLSRS 361
           LL +SGT+PD VT++GVLSACTHAGLVDKGLEYF+ IKEK+GL  TADHYACV+DLL+RS
Sbjct: 412 LLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARS 471

Query: 362 GRFR 373
           GRF+
Sbjct: 472 GRFK 475



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
 Frame = +2

Query: 26  SALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFDLLCRSGTQ 205
           SAL+ +Y KCGS++ A  +F  +   D+VSWT++I+   ++G+  E   LF  L +SG +
Sbjct: 259 SALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVR 318

Query: 206 PDHVTFIGVLSACTHAGLVDKGLEYFYLIKEKYGLSLTADH------YACVVDLLSRSGR 367
           P+  TF GVL+AC      D   E  +L KE +G  + A +       + +V + S+ G 
Sbjct: 319 PNEYTFAGVLNAC-----ADHAAE--HLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGN 371

Query: 368 FR 373
            R
Sbjct: 372 TR 373



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/98 (33%), Positives = 53/98 (54%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           F P  F ++ L+ MYAKCGS+  A  +F  +   DL SW ++I GYA+ G+  +A KLFD
Sbjct: 118 FVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFD 177

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIK 295
            +     Q D+ ++   +S         + LE F +++
Sbjct: 178 EM----PQRDNFSWNAAISGYVTHNQPREALELFRVMQ 211


>ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75097747|sp|O23169.1|PP353_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g37170 gi|2464864|emb|CAB16758.1| putative protein
           [Arabidopsis thaliana] gi|7270666|emb|CAB80383.1|
           putative protein [Arabidopsis thaliana]
           gi|332661361|gb|AEE86761.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/123 (73%), Positives = 103/123 (83%)
 Frame = +2

Query: 2   FDPYSFAASALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           FDPYSFA+S+LV MY KCG+IE A  V    P+PDLVSWTSLI G AQNGQP EALK FD
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409

Query: 182 LLCRSGTQPDHVTFIGVLSACTHAGLVDKGLEYFYLIKEKYGLSLTADHYACVVDLLSRS 361
           LL +SGT+PDHVTF+ VLSACTHAGLV+KGLE+FY I EK+ LS T+DHY C+VDLL+RS
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469

Query: 362 GRF 370
           GRF
Sbjct: 470 GRF 472



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/73 (42%), Positives = 45/73 (61%)
 Frame = +2

Query: 26  SALVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFDLLCRSGTQ 205
           S+L+ MY KCG I+ A  +F  +   D+VSWTS+I+ Y ++ +  E   LF  L  S  +
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316

Query: 206 PDHVTFIGVLSAC 244
           P+  TF GVL+AC
Sbjct: 317 PNEYTFAGVLNAC 329



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = +2

Query: 32  LVHMYAKCGSIERACRVFKNLPRPDLVSWTSLINGYAQNGQPHEALKLFD 181
           L+ MYAKCGS+  A +VF  +P  DL SW  ++NGYA+ G   EA KLFD
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175