BLASTX nr result

ID: Scutellaria24_contig00012476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012476
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
emb|CBI29027.3| unnamed protein product [Vitis vinifera]              180   9e-44
ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]   180   9e-44

>ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|222852973|gb|EEE90520.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  185 bits (470), Expect = 3e-45
 Identities = 85/123 (69%), Positives = 106/123 (86%)
 Frame = +3

Query: 12  EAYHFVARMPMKPTASMLGALFNGCINHRKLDLAEIVGKRLIELDPAHDGRYIGLSNVYA 191
           EAY F+ +MP++PTASMLGAL +GC+NH KLDLAE++GK+LIELDP HDGRY+GLSNVYA
Sbjct: 298 EAYQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYA 357

Query: 192 VIRRWDKARRTREAMKSRGVRKFPGYSYVEVYGALHRFIAHDKVHPESQEIYSMLSIIGE 371
           + RRWD+AR  REAM+ RGV+K PGYS++E+ GA HRFIAHDK HP S++IY+MLS I  
Sbjct: 358 IGRRWDEARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIVS 417

Query: 372 QMK 380
           QM+
Sbjct: 418 QMQ 420


>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Glycine max]
          Length = 548

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/134 (64%), Positives = 104/134 (77%)
 Frame = +3

Query: 6   LEEAYHFVARMPMKPTASMLGALFNGCINHRKLDLAEIVGKRLIELDPAHDGRYIGLSNV 185
           L  AY F+ +MP +PTASMLGAL +GCINHR L LAEIVG++LIEL+P HDGRYIGLSN+
Sbjct: 400 LTTAYQFICQMPTEPTASMLGALLSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNM 459

Query: 186 YAVIRRWDKARRTREAMKSRGVRKFPGYSYVEVYGALHRFIAHDKVHPESQEIYSMLSII 365
           YAV +RWD AR  REAM+ RGV+K PG+S+VE+ G LHRFIAHDK HP+S+E Y ML+ +
Sbjct: 460 YAVDKRWDDARSMREAMERRGVKKSPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFV 519

Query: 366 GEQMKSKTDP*RQE 407
             QMK       QE
Sbjct: 520 VYQMKLSCHEDNQE 533


>emb|CBI29027.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/134 (64%), Positives = 105/134 (78%)
 Frame = +3

Query: 6   LEEAYHFVARMPMKPTASMLGALFNGCINHRKLDLAEIVGKRLIELDPAHDGRYIGLSNV 185
           L EAY F+A+MPM+PTASMLGAL NGC+NHR+ DLAE VG++LIEL+P HDGRYIGLSNV
Sbjct: 243 LAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNV 302

Query: 186 YAVIRRWDKARRTREAMKSRGVRKFPGYSYVEVYGALHRFIAHDKVHPESQEIYSMLSII 365
           YA ++ WD AR  REAM+ RGV+K PG+S+VEV G LHRFIAHDK H + ++IY ML+ I
Sbjct: 303 YAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTI 362

Query: 366 GEQMKSKTDP*RQE 407
             QM    D   QE
Sbjct: 363 VRQMMVDVDFETQE 376


>ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Vitis vinifera]
          Length = 539

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/134 (64%), Positives = 105/134 (78%)
 Frame = +3

Query: 6   LEEAYHFVARMPMKPTASMLGALFNGCINHRKLDLAEIVGKRLIELDPAHDGRYIGLSNV 185
           L EAY F+A+MPM+PTASMLGAL NGC+NHR+ DLAE VG++LIEL+P HDGRYIGLSNV
Sbjct: 398 LAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNV 457

Query: 186 YAVIRRWDKARRTREAMKSRGVRKFPGYSYVEVYGALHRFIAHDKVHPESQEIYSMLSII 365
           YA ++ WD AR  REAM+ RGV+K PG+S+VEV G LHRFIAHDK H + ++IY ML+ I
Sbjct: 458 YAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTI 517

Query: 366 GEQMKSKTDP*RQE 407
             QM    D   QE
Sbjct: 518 VRQMMVDVDFETQE 531


>emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
          Length = 532

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/134 (64%), Positives = 105/134 (78%)
 Frame = +3

Query: 6   LEEAYHFVARMPMKPTASMLGALFNGCINHRKLDLAEIVGKRLIELDPAHDGRYIGLSNV 185
           L EAY F+A+MPM+PTASMLGAL NGC+NHR+ DLAE VG++LIEL+P HDGRYIGLSNV
Sbjct: 391 LAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNV 450

Query: 186 YAVIRRWDKARRTREAMKSRGVRKFPGYSYVEVYGALHRFIAHDKVHPESQEIYSMLSII 365
           YA ++ WD AR  REAM+ RGV+K PG+S+VEV G LHRFIAHDK H + ++IY ML+ I
Sbjct: 451 YAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTI 510

Query: 366 GEQMKSKTDP*RQE 407
             QM    D   QE
Sbjct: 511 VRQMMVDVDFETQE 524


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