BLASTX nr result

ID: Scutellaria24_contig00012437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012437
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   117   2e-24
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   116   4e-24
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]              111   2e-22
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab...   110   3e-22
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ...   110   3e-22

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score =  117 bits (294), Expect = 2e-24
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +3

Query: 285 MVNAVKGLYISCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDVAGMIKSAIATF 464
           MVNA KGL+ISCDIPMAQFIINMNAS+P SQKFIIHVLD+THLFV+  VA MI+SAI+ F
Sbjct: 1   MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60

Query: 465 REQNSYEKPS 494
           REQNSYEKP+
Sbjct: 61  REQNSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  116 bits (291), Expect = 4e-24
 Identities = 55/70 (78%), Positives = 64/70 (91%)
 Frame = +3

Query: 285 MVNAVKGLYISCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDVAGMIKSAIATF 464
           MVNA KGL+ISCDIPMAQFIIN+NASLP SQKFIIH+LD+TH+FV+  V+ MI+SAI+ F
Sbjct: 1   MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60

Query: 465 REQNSYEKPS 494
           REQNSYEKPS
Sbjct: 61  REQNSYEKPS 70


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score =  111 bits (277), Expect = 2e-22
 Identities = 50/74 (67%), Positives = 64/74 (86%)
 Frame = +3

Query: 273 RTFIMVNAVKGLYISCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDVAGMIKSA 452
           +  +MVNA+KG+++SCDIPM QFI+NMN S+P SQKFIIHVLD+THLFV+  V  MI+SA
Sbjct: 39  QVLLMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSA 98

Query: 453 IATFREQNSYEKPS 494
           I+ FR+QNSYEKP+
Sbjct: 99  ISDFRDQNSYEKPT 112


>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
           lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
           ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
          Length = 71

 Score =  110 bits (275), Expect = 3e-22
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = +3

Query: 285 MVNAVKGLYISCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDVAGMIKSAIATF 464
           MVNA+KG++ISCDIPM QFI+NMN S+P SQKFIIHVLD+THLFV+  V  MI+SAI+ F
Sbjct: 1   MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60

Query: 465 REQNSYEKPS 494
           R+QNSYEKP+
Sbjct: 61  RDQNSYEKPT 70


>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
           sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
           general transcription factor IIH subunit 5-like [Cucumis
           sativus]
          Length = 70

 Score =  110 bits (274), Expect = 3e-22
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = +3

Query: 285 MVNAVKGLYISCDIPMAQFIINMNASLPQSQKFIIHVLDNTHLFVRSDVAGMIKSAIATF 464
           MVNA+KG++ISCDIPMAQFIIN NASLP S +FIIH+LDNTH+FV+  VA MI++AI+ F
Sbjct: 1   MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF 60

Query: 465 REQNSYEKPS 494
           REQ SYEKP+
Sbjct: 61  REQISYEKPT 70


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