BLASTX nr result

ID: Scutellaria24_contig00012377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012377
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36810.1| unknown [Lotus japonicus]                              148   1e-33
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun...   146   5e-33
gb|AFK35687.1| unknown [Medicago truncatula]                          144   2e-32
ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   144   2e-32
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   142   5e-32

>gb|AFK36810.1| unknown [Lotus japonicus]
          Length = 104

 Score =  148 bits (374), Expect = 1e-33
 Identities = 76/133 (57%), Positives = 90/133 (67%)
 Frame = +3

Query: 12  MEHGSYQDPSQATFSLTDEDHTLANSIRHILNQDPRVTFCGYSIPHPSDAXXXXXXXXXX 191
           MEHGS+ D S++TFSLTDEDHT AN+IR+ LNQDPRVTFCGYSIPHPSD           
Sbjct: 1   MEHGSHSDESRSTFSLTDEDHTFANAIRYTLNQDPRVTFCGYSIPHPSD----------- 49

Query: 192 XXXXXXXXXXXXXXXXXXXXXRVNMRVQTTGDPASEVLKDSCQDLMLVCQHVRSSVDQAV 371
                                RVN+RVQTTG+PA EVLKDSCQ +ML+CQHVR + D+AV
Sbjct: 50  --------------------NRVNIRVQTTGEPAREVLKDSCQHMMLMCQHVRGTFDKAV 89

Query: 372 SEFKSKTGIKPMN 410
           ++FKSK G K M+
Sbjct: 90  NDFKSKKGGKDMD 102


>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 115

 Score =  146 bits (368), Expect = 5e-33
 Identities = 74/130 (56%), Positives = 87/130 (66%)
 Frame = +3

Query: 12  MEHGSYQDPSQATFSLTDEDHTLANSIRHILNQDPRVTFCGYSIPHPSDAXXXXXXXXXX 191
           MEHGSY D S++TFSL DEDHT ANS+R ILNQDPRVTFCGYSIPHPS+           
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFILNQDPRVTFCGYSIPHPSE----------- 49

Query: 192 XXXXXXXXXXXXXXXXXXXXXRVNMRVQTTGDPASEVLKDSCQDLMLVCQHVRSSVDQAV 371
                                RVN+RVQTTGDPASEVLKD CQDLML+CQHVRS+  +AV
Sbjct: 50  --------------------NRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAV 89

Query: 372 SEFKSKTGIK 401
           ++FK+   ++
Sbjct: 90  NDFKTSKSVR 99


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  144 bits (363), Expect = 2e-32
 Identities = 73/130 (56%), Positives = 86/130 (66%)
 Frame = +3

Query: 12  MEHGSYQDPSQATFSLTDEDHTLANSIRHILNQDPRVTFCGYSIPHPSDAXXXXXXXXXX 191
           MEHGSY D S++TFSL DEDHT ANS+R  LNQDPRVTFCGYSIPHPS+           
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSE----------- 49

Query: 192 XXXXXXXXXXXXXXXXXXXXXRVNMRVQTTGDPASEVLKDSCQDLMLVCQHVRSSVDQAV 371
                                RVN+RVQTTGDPASEVLKD CQDLML+CQHVRS+  +AV
Sbjct: 50  --------------------NRVNVRVQTTGDPASEVLKDGCQDLMLMCQHVRSTFGKAV 89

Query: 372 SEFKSKTGIK 401
           ++FK+   ++
Sbjct: 90  NDFKTSKSVR 99


>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  144 bits (363), Expect = 2e-32
 Identities = 75/133 (56%), Positives = 88/133 (66%)
 Frame = +3

Query: 12  MEHGSYQDPSQATFSLTDEDHTLANSIRHILNQDPRVTFCGYSIPHPSDAXXXXXXXXXX 191
           MEHGS+ D S++TFSL+DEDHTLANSIR  LNQDPRV FCGYSIPHPSDA          
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDA---------- 50

Query: 192 XXXXXXXXXXXXXXXXXXXXXRVNMRVQTTGDPASEVLKDSCQDLMLVCQHVRSSVDQAV 371
                                RVN+RVQTTGD A EVLKD+CQDLML+CQHVRS+ D+AV
Sbjct: 51  ---------------------RVNIRVQTTGDSAREVLKDACQDLMLMCQHVRSTFDKAV 89

Query: 372 SEFKSKTGIKPMN 410
            ++K    +K M+
Sbjct: 90  VDYKMSKPVKDMS 102


>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  142 bits (359), Expect = 5e-32
 Identities = 72/124 (58%), Positives = 84/124 (67%)
 Frame = +3

Query: 12  MEHGSYQDPSQATFSLTDEDHTLANSIRHILNQDPRVTFCGYSIPHPSDAXXXXXXXXXX 191
           MEHGSY D S++TFSL DEDHT AN++R  LNQDPRV+FCGYSIPHPSD           
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSD----------- 49

Query: 192 XXXXXXXXXXXXXXXXXXXXXRVNMRVQTTGDPASEVLKDSCQDLMLVCQHVRSSVDQAV 371
                                RVN+RVQTTGDP+ EVLKD+CQDLML+CQHVRS+ D+AV
Sbjct: 50  --------------------NRVNIRVQTTGDPSREVLKDACQDLMLMCQHVRSTFDKAV 89

Query: 372 SEFK 383
           S+FK
Sbjct: 90  SDFK 93


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