BLASTX nr result

ID: Scutellaria24_contig00012338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012338
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   358   4e-97
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   350   1e-94
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              350   1e-94
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   344   8e-93
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   341   5e-92

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  358 bits (919), Expect = 4e-97
 Identities = 169/199 (84%), Positives = 185/199 (92%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 RDGPVRPVVRMFYDHLQPINDLDFHPQNTILISGAKDRTIKFYDFSKTVARKAFKIIQDT 416
           RDGPVRPV+R FYDH+QPINDLDFHPQNT+LISGAKD TIKF+DFSK  A+KAF++IQDT
Sbjct: 167 RDGPVRPVIRTFYDHIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDT 226

Query: 415 HNVRSVSFHPSGEFLLAGTDHPIVHLYDVNTFQCYLSANVQEIS-NGAINQVRYSSTGGM 239
           HNVRSVSFHPSG+FLLAGTDH I HLYDVNTFQCYLSANV EI  NGAINQVRYSSTGGM
Sbjct: 227 HNVRSVSFHPSGDFLLAGTDHQIAHLYDVNTFQCYLSANVPEIGMNGAINQVRYSSTGGM 286

Query: 238 YVTASKDGAVRLWDGVTSQCVRSILGAHGTAEATSAKFTKDQRYVLSSGKDSVVNLWEVG 59
           YVTASKDGA+RLWDGVT+ C+RSI+GAHGTAE+TSA FTKDQR+VLS GKDS + LWEVG
Sbjct: 287 YVTASKDGAIRLWDGVTANCIRSIVGAHGTAESTSATFTKDQRFVLSCGKDSSIKLWEVG 346

Query: 58  TGRLVKQYIGATHTQLRCQ 2
           +GRLVKQYIGATHTQLRCQ
Sbjct: 347 SGRLVKQYIGATHTQLRCQ 365


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  350 bits (897), Expect = 1e-94
 Identities = 162/199 (81%), Positives = 185/199 (92%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 RDGPVRPVVRMFYDHLQPINDLDFHPQNTILISGAKDRTIKFYDFSKTVARKAFKIIQDT 416
           RDGPVRPV+R FYDH+QPINDLDFHPQ+T+LISGAKD TIKF+DFSKTVA++AF++IQDT
Sbjct: 172 RDGPVRPVIRTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDT 231

Query: 415 HNVRSVSFHPSGEFLLAGTDHPIVHLYDVNTFQCYLSANVQEIS-NGAINQVRYSSTGGM 239
           HNVRSVSFHPSG+FLLAGTDHP+ HLYDVNTFQCYLSANVQ++  + +INQVRYSS G M
Sbjct: 232 HNVRSVSFHPSGDFLLAGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDM 291

Query: 238 YVTASKDGAVRLWDGVTSQCVRSILGAHGTAEATSAKFTKDQRYVLSSGKDSVVNLWEVG 59
           YVTASKDGA+RLWDGVT+ CVRSI+GAHGTAEATSA FTKDQR+VLS GKDS V LWE+G
Sbjct: 292 YVTASKDGAIRLWDGVTANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIG 351

Query: 58  TGRLVKQYIGATHTQLRCQ 2
           +G+LVKQY+GA HTQLRCQ
Sbjct: 352 SGKLVKQYLGAAHTQLRCQ 370


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  350 bits (897), Expect = 1e-94
 Identities = 162/199 (81%), Positives = 185/199 (92%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 RDGPVRPVVRMFYDHLQPINDLDFHPQNTILISGAKDRTIKFYDFSKTVARKAFKIIQDT 416
           RDGPVRPV+R FYDH+QPINDLDFHPQ+T+LISGAKD TIKF+DFSKTVA++AF++IQDT
Sbjct: 216 RDGPVRPVIRTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDT 275

Query: 415 HNVRSVSFHPSGEFLLAGTDHPIVHLYDVNTFQCYLSANVQEIS-NGAINQVRYSSTGGM 239
           HNVRSVSFHPSG+FLLAGTDHP+ HLYDVNTFQCYLSANVQ++  + +INQVRYSS G M
Sbjct: 276 HNVRSVSFHPSGDFLLAGTDHPVAHLYDVNTFQCYLSANVQDLGISASINQVRYSSNGDM 335

Query: 238 YVTASKDGAVRLWDGVTSQCVRSILGAHGTAEATSAKFTKDQRYVLSSGKDSVVNLWEVG 59
           YVTASKDGA+RLWDGVT+ CVRSI+GAHGTAEATSA FTKDQR+VLS GKDS V LWE+G
Sbjct: 336 YVTASKDGAIRLWDGVTANCVRSIVGAHGTAEATSASFTKDQRFVLSCGKDSSVKLWEIG 395

Query: 58  TGRLVKQYIGATHTQLRCQ 2
           +G+LVKQY+GA HTQLRCQ
Sbjct: 396 SGKLVKQYLGAAHTQLRCQ 414


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  344 bits (882), Expect = 8e-93
 Identities = 159/199 (79%), Positives = 183/199 (91%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 RDGPVRPVVRMFYDHLQPINDLDFHPQNTILISGAKDRTIKFYDFSKTVARKAFKIIQDT 416
           +DGPVRPV+R FYDH+QPINDLDFHPQNT+L+SGAKD TIKF+DFSK  A+KAF++IQDT
Sbjct: 167 KDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDT 226

Query: 415 HNVRSVSFHPSGEFLLAGTDHPIVHLYDVNTFQCYLSANVQEI-SNGAINQVRYSSTGGM 239
           HNVRS+S HPSG++LLAGTDH I HLYDVNTFQC+LSANV EI +NGAINQ+RYS+TG M
Sbjct: 227 HNVRSISLHPSGDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSM 286

Query: 238 YVTASKDGAVRLWDGVTSQCVRSILGAHGTAEATSAKFTKDQRYVLSSGKDSVVNLWEVG 59
           YVTASKDGAVRLWDG+ ++C+RSI+ AHGTAEATSAKFTKD+RYVLS GKDS V LW+VG
Sbjct: 287 YVTASKDGAVRLWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCGKDSSVKLWDVG 346

Query: 58  TGRLVKQYIGATHTQLRCQ 2
           TGRLVKQY+GATH QLRCQ
Sbjct: 347 TGRLVKQYVGATHIQLRCQ 365


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  341 bits (875), Expect = 5e-92
 Identities = 158/199 (79%), Positives = 182/199 (91%), Gaps = 1/199 (0%)
 Frame = -2

Query: 595 RDGPVRPVVRMFYDHLQPINDLDFHPQNTILISGAKDRTIKFYDFSKTVARKAFKIIQDT 416
           +DGPVRPV+R FYDH+QPINDLDFHPQNT+L+SGAKD TIKF+DFSK  A+KAF++IQDT
Sbjct: 169 KDGPVRPVIRTFYDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDT 228

Query: 415 HNVRSVSFHPSGEFLLAGTDHPIVHLYDVNTFQCYLSANVQEI-SNGAINQVRYSSTGGM 239
           HNVRS+S HPSG++LLAGTDH I HLYDVNTFQC+LSANV EI +NGAINQ+RYS+TG M
Sbjct: 229 HNVRSISLHPSGDYLLAGTDHQIPHLYDVNTFQCFLSANVPEIGNNGAINQIRYSATGSM 288

Query: 238 YVTASKDGAVRLWDGVTSQCVRSILGAHGTAEATSAKFTKDQRYVLSSGKDSVVNLWEVG 59
           YVTASKDGAVRLWDG+ ++C+RSI+ AHGTAEATSAKFTKD+RYVLS  KDS V LW+VG
Sbjct: 289 YVTASKDGAVRLWDGIGAKCIRSIVSAHGTAEATSAKFTKDERYVLSCXKDSSVKLWDVG 348

Query: 58  TGRLVKQYIGATHTQLRCQ 2
           TGRLVKQY+GATH QLRCQ
Sbjct: 349 TGRLVKQYVGATHIQLRCQ 367


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