BLASTX nr result

ID: Scutellaria24_contig00012308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012308
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   164   5e-39
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   162   2e-38
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   162   3e-38
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]   162   3e-38
ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus ...   159   3e-37

>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  164 bits (416), Expect = 5e-39
 Identities = 79/86 (91%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 KQEIEKYRASNPKITEQFADLKRKLYTMSTEEWDNIPEIGDYSLRNKKKRFESFVPVPDT 80
           KQEIEKYRASNPKITEQF+DLKRKLYTMS  EWD+IPEIGDYSLRNKKKRFESFVPVPDT
Sbjct: 218 KQEIEKYRASNPKITEQFSDLKRKLYTMSANEWDSIPEIGDYSLRNKKKRFESFVPVPDT 277

Query: 79  LLEKARQEKEHVSALDPRSRAAGGTE 2
           LLEKARQE+EHV+ALDP+SRAAGGTE
Sbjct: 278 LLEKARQEQEHVTALDPKSRAAGGTE 303


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
           gi|449514699|ref|XP_004164455.1| PREDICTED:
           pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/86 (89%), Positives = 85/86 (98%)
 Frame = -3

Query: 259 KQEIEKYRASNPKITEQFADLKRKLYTMSTEEWDNIPEIGDYSLRNKKKRFESFVPVPDT 80
           K+EIEKYRASNPKITEQFADLKRKLYT+S +EW++IPEIGDYSLRNKKKRFESFVPVPDT
Sbjct: 218 KEEIEKYRASNPKITEQFADLKRKLYTLSAQEWESIPEIGDYSLRNKKKRFESFVPVPDT 277

Query: 79  LLEKARQEKEHVSALDPRSRAAGGTE 2
           LLEKARQE+EHV+ALDP+SRAAGGTE
Sbjct: 278 LLEKARQEQEHVTALDPKSRAAGGTE 303


>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 KQEIEKYRASNPKITEQFADLKRKLYTMSTEEWDNIPEIGDYSLRNKKKRFESFVPVPDT 80
           KQEIEKYRASNPKITEQFADLKRKL T+S +EWD+IPEIGDYSLRNKK+RFESFVPVPDT
Sbjct: 218 KQEIEKYRASNPKITEQFADLKRKLCTLSAQEWDSIPEIGDYSLRNKKRRFESFVPVPDT 277

Query: 79  LLEKARQEKEHVSALDPRSRAAGGTE 2
           LLEKARQE+EHV+ALDPRSRAAGGTE
Sbjct: 278 LLEKARQEQEHVTALDPRSRAAGGTE 303


>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/86 (90%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 KQEIEKYRASNPKITEQFADLKRKLYTMSTEEWDNIPEIGDYSLRNKKKRFESFVPVPDT 80
           KQEIEKYRASNPKITEQFADLKRKL T+S +EWD+IPEIGDYSLRNKK+RFESFVPVPDT
Sbjct: 218 KQEIEKYRASNPKITEQFADLKRKLCTLSAQEWDSIPEIGDYSLRNKKRRFESFVPVPDT 277

Query: 79  LLEKARQEKEHVSALDPRSRAAGGTE 2
           LLEKARQE+EHV+ALDPRSRAAGGTE
Sbjct: 278 LLEKARQEQEHVTALDPRSRAAGGTE 303


>ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus communis]
           gi|223542929|gb|EEF44465.1| pre-mRNA splicing factor,
           putative [Ricinus communis]
          Length = 1031

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/86 (87%), Positives = 84/86 (97%)
 Frame = -3

Query: 259 KQEIEKYRASNPKITEQFADLKRKLYTMSTEEWDNIPEIGDYSLRNKKKRFESFVPVPDT 80
           K+EIEKYRASNPKITEQFADLKRKL+T+S EEW++IP+IGDYSLRNKKKRFESFVPVPDT
Sbjct: 226 KEEIEKYRASNPKITEQFADLKRKLHTLSAEEWESIPDIGDYSLRNKKKRFESFVPVPDT 285

Query: 79  LLEKARQEKEHVSALDPRSRAAGGTE 2
           LLEKARQE+EHV+ALDP+SRAAGG E
Sbjct: 286 LLEKARQEQEHVTALDPKSRAAGGAE 311


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