BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012236
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...    88   8e-16
ref|XP_003591384.1| Pentatricopeptide repeat-containing protein ...    85   7e-15
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    84   9e-15
emb|CBI36964.3| unnamed protein product [Vitis vinifera]               84   9e-15

>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 5/81 (6%)
 Frame = +3

Query: 45  RRLSTAVESAVPI-----REEDSLYQRLSKLGHLKGTVASTINEYTREGRVVTKFELGKC 209
           +R STA E+AVP      R+ + LY +LS LG   G+V+ T+NE+  EG+ +TK EL +C
Sbjct: 18  QRFSTA-EAAVPPAVVSPRQSEKLYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRC 76

Query: 210 IKELRKYKRFNHALEIMEWME 272
           I+ELRKY+RF+HA EIMEWME
Sbjct: 77  IRELRKYRRFDHAFEIMEWME 97


>ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480432|gb|AES61635.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 539

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = +3

Query: 15  RLPGGAPALFRRLSTAVESAVPIREEDSLYQRLSKLGHLKGTVASTINEYTREGRVVTKF 194
           RL  G   L RRL TA  +A    ++ +LY+RL+ L    GTV+ T+N+Y  EG+ + K 
Sbjct: 64  RLISGGGRLLRRLCTAATAAELPNKKANLYRRLADLEKTGGTVSQTLNQYIIEGKALGKD 123

Query: 195 ELGKCIKELRKYKRFNHALEIMEWM 269
           EL +C++ELRKY+RF+HA EIMEWM
Sbjct: 124 ELERCVQELRKYRRFHHAFEIMEWM 148


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/65 (58%), Positives = 48/65 (73%)
 Frame = +3

Query: 78  PIREEDSLYQRLSKLGHLKGTVASTINEYTREGRVVTKFELGKCIKELRKYKRFNHALEI 257
           P   +  LY RLS LG   G+VA TIN++  EG +V K+EL KCIKELRKY+R++H L+I
Sbjct: 4   PANNQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQI 63

Query: 258 MEWME 272
           MEWME
Sbjct: 64  MEWME 68


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
 Frame = +3

Query: 15  RLPGGAPALFRRLSTAVESAVPIR----------EEDSLYQRLSKLGHLKGTVASTINEY 164
           RL      L RRL TA  +  P             +  LY RLS LG   G+VA T+NE+
Sbjct: 8   RLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSVADTLNEH 67

Query: 165 TREGRVVTKFELGKCIKELRKYKRFNHALEIMEWME 272
            +EG+++ K EL  CIK+LRKY++F HALEIM+WME
Sbjct: 68  IKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWME 103


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
 Frame = +3

Query: 15  RLPGGAPALFRRLSTAVESAVPIR----------EEDSLYQRLSKLGHLKGTVASTINEY 164
           RL      L RRL TA  +  P             +  LY RLS LG   G+VA T+NE+
Sbjct: 47  RLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSVADTLNEH 106

Query: 165 TREGRVVTKFELGKCIKELRKYKRFNHALEIMEWME 272
            +EG+++ K EL  CIK+LRKY++F HALEIM+WME
Sbjct: 107 IKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWME 142