BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00012058
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   261   2e-67
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   260   4e-67
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp....   237   3e-60
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin...   236   1e-59
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype...   233   5e-59

>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  261 bits (667), Expect = 2e-67
 Identities = 128/197 (64%), Positives = 152/197 (77%)
 Frame = -1

Query: 879 MFFLSEIEHSXXXXXXXXXXXLDEAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFVF 700
           MFFLS IEH+           L+EAIKGEL+S+FLDKV+  LGLC+SVYDIRSIDGGFVF
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 699 PGEGASTYKVTFRLVMFRPFEGEVISAQLLESTADGLRLSLGFFDDIYVPVPLLLTPNHS 520
           PG+GASTY V FRLVMFRPF GE+I+A+L ES A+GL+LSLGFFDDIY+PV L+  P H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 519 EPDPNHKNGVLWIWEYAGENYAIDGSSEIRFKVHSVSYPPIPLEPDVKSDQKNVKPFAPM 340
           EPDP +K+ V+WIW+Y  + + IDG  EIRF+V SVSYPPIP+E       K  KPFAPM
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVE-----QPKESKPFAPM 175

Query: 339 VITGSLDGDGFGPISWW 289
           +I GSLD DG GP+SWW
Sbjct: 176 MIMGSLDYDGLGPVSWW 192


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  260 bits (665), Expect = 4e-67
 Identities = 129/197 (65%), Positives = 150/197 (76%)
 Frame = -1

Query: 879 MFFLSEIEHSXXXXXXXXXXXLDEAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFVF 700
           MF+LS IEH+           L+EAIKGEL+S+FLDKVI  LGLC+SVYDIRSIDGGFVF
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 699 PGEGASTYKVTFRLVMFRPFEGEVISAQLLESTADGLRLSLGFFDDIYVPVPLLLTPNHS 520
           PG+GASTY V FRLVMFRPF GE+I+A+L ES A+GLRLSLGFFDDIY+PV L+  P H 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 519 EPDPNHKNGVLWIWEYAGENYAIDGSSEIRFKVHSVSYPPIPLEPDVKSDQKNVKPFAPM 340
           EP+P  K  V+WIW+Y  + + IDG  EIRF+V SVSYPPIP+E       K  KPFAPM
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVE-----QPKESKPFAPM 175

Query: 339 VITGSLDGDGFGPISWW 289
           VI GSLD DG GP+SWW
Sbjct: 176 VIMGSLDYDGLGPVSWW 192


>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335460|gb|EFH65877.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  237 bits (605), Expect = 3e-60
 Identities = 112/199 (56%), Positives = 149/199 (74%), Gaps = 2/199 (1%)
 Frame = -1

Query: 879 MFFLSEIEHSXXXXXXXXXXXLDEAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFVF 700
           MF+LSE+EHS           L++AIK  L ++FLDKV+  LGLCVSVYDI+SI+GGFV 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60

Query: 699 PGEGASTYKVTFRLVMFRPFEGEVISAQLLESTADGLRLSLGFFDDIYVPVPLLLTPNHS 520
           PG+GA+TYKV FR+V+FRPF GEVI+A+  ES ++GLRL+LGFFDDIYVP PL+  PN  
Sbjct: 61  PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 519 EPDPNHKNGVLWIWEYAG--ENYAIDGSSEIRFKVHSVSYPPIPLEPDVKSDQKNVKPFA 346
           EPDP ++  ++W+WEY    E++ ID S +I+F+V S+SYP +P E       ++ KPFA
Sbjct: 121 EPDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTE-----RAEDAKPFA 175

Query: 345 PMVITGSLDGDGFGPISWW 289
           PMV+TG++D DG GP+SWW
Sbjct: 176 PMVVTGNMDEDGLGPVSWW 194


>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
           gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
           protein [Arabidopsis thaliana]
           gi|17529108|gb|AAL38764.1| putative RNA polymerase
           [Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
           putative RNA polymerase [Arabidopsis thaliana]
           gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis
           thaliana]
          Length = 204

 Score =  236 bits (601), Expect = 1e-59
 Identities = 109/199 (54%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
 Frame = -1

Query: 879 MFFLSEIEHSXXXXXXXXXXXLDEAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFVF 700
           MF+LSE+EHS           L++AIK  L ++FLDKV+  LGLCVS+YDI+S++GGFV 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 699 PGEGASTYKVTFRLVMFRPFEGEVISAQLLESTADGLRLSLGFFDDIYVPVPLLLTPNHS 520
           PG+GA+TYKV  R+V+FRPF GEVI+A+  ES A+GLRL+LGFFDDIYVP PL+  PN  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 519 EPDPNHKNGVLWIWEYA--GENYAIDGSSEIRFKVHSVSYPPIPLEPDVKSDQKNVKPFA 346
           EPDP ++  ++W+WEY    E+Y +D + +I+F+V S+SYP +P E       ++ KPFA
Sbjct: 121 EPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTE-----RAEDAKPFA 175

Query: 345 PMVITGSLDGDGFGPISWW 289
           PMV+TG++D DG GP+SWW
Sbjct: 176 PMVVTGNMDDDGLGPVSWW 194


>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
           [Ricinus communis] gi|223539824|gb|EEF41404.1|
           DNA-directed RNA polymerase III 25 kD polypeptide,
           putative [Ricinus communis]
          Length = 194

 Score =  233 bits (595), Expect = 5e-59
 Identities = 114/201 (56%), Positives = 144/201 (71%), Gaps = 4/201 (1%)
 Frame = -1

Query: 879 MFFLSEIEHSXXXXXXXXXXXLDEAIKGELDSIFLDKVIDKLGLCVSVYDIRSIDGGFVF 700
           MF+LSEIEH+           L +A+K EL+ IFLDKVI  LGLC+SVYD+  IDGGF+F
Sbjct: 1   MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60

Query: 699 PGEGASTYKVTFRLVMFRPFEGEVISAQLLESTADGLRLSLGFFDDIYVPVPLLLTPNHS 520
           PG+GASTY V FR+V+FRPF GE+I A+L ES  DGLRLSLGFFDDIY+P   L  P++S
Sbjct: 61  PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120

Query: 519 EPDPNHKNGVLWIWEYAGEN----YAIDGSSEIRFKVHSVSYPPIPLEPDVKSDQKNVKP 352
           + DP ++   +WIWE+  E+    + IDG  EI+F+V SV YPP+PLE       +  KP
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLE-------QQEKP 173

Query: 351 FAPMVITGSLDGDGFGPISWW 289
           FAPMVITGS+D +G GP+SWW
Sbjct: 174 FAPMVITGSIDDEGLGPVSWW 194