BLASTX nr result

ID: Scutellaria24_contig00011965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011965
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   378   e-102
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   371   e-100
ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   363   3e-98

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score =  378 bits (970), Expect = e-102
 Identities = 186/256 (72%), Positives = 207/256 (80%), Gaps = 1/256 (0%)
 Frame = +2

Query: 2   CKPASIPVHPCGQYRKNTVVGILQAEHELGSLFPIHRLDRLVSGLLILARNATKADIFRQ 181
           CKPAS+PVHPCGQYRKNTVVGILQAEH L  LFPIHRLDRLVSGLLILAR+A+KAD FRQ
Sbjct: 129 CKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQ 188

Query: 182 QIESGEVKKQYIARVIGVFPDNEKVANVNVNYNAREGKSTVELENGSNGKNPSKGKASCT 361
           QIE+G V+KQYIA+V GVFPD+E+V NVNVNYNAREG+STVE+ N   G  P KGK++CT
Sbjct: 189 QIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGN-CCGNTPLKGKSACT 247

Query: 362 KFTGISTNGTQSLVLCEPITGRTHQIRVHLQYLGYPIANDMLYQSECVSNRSTEGLSADR 541
           KFT ISTNGT S+VLCEPITGRTHQIRVHLQY G+PIANDMLY SE   +RST+GLSADR
Sbjct: 248 KFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADR 307

Query: 542 AAPKSGFS-PKSDNCHIHEPQSAHEPVEEFRIDPMCTNCPNLPPIGYDGREEGLWLHCVR 718
           AA  SG S P S      +         +F IDPMCTNCPNL P GYD  EEGLWLHC+R
Sbjct: 308 AAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIR 367

Query: 719 YSGPGWTYECPYPDWA 766
           Y GP W YECP+P+WA
Sbjct: 368 YCGPDWVYECPHPEWA 383


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score =  377 bits (967), Expect = e-102
 Identities = 177/256 (69%), Positives = 217/256 (84%), Gaps = 2/256 (0%)
 Frame = +2

Query: 5   KPASIPVHPCGQYRKNTVVGILQAEHELGSLFPIHRLDRLVSGLLILARNATKADIFRQQ 184
           KPA++PVHPCGQYRKNTVVG+LQAEH L  LFP+HRLDRLVSGLLILARNAT+AD+FRQ+
Sbjct: 135 KPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQE 194

Query: 185 IESGEVKKQYIARVIGVFPDNEKVANVNVNYNAREGKSTVELENGSNGKNPSKGKASCTK 364
           IE+G+V+KQY+A+VIGVFP++E++ +VNVNYNAREG+STVE+ N  +G +P KGK +CTK
Sbjct: 195 IEAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDG-SPIKGKTACTK 253

Query: 365 FTGISTNGTQSLVLCEPITGRTHQIRVHLQYLGYPIANDMLYQSECVSNRSTEGLSADRA 544
           FT I TNG  S+VLC+PITGRTHQIRVHLQY G+PIAND+LY SE V+NRS+EG++ADRA
Sbjct: 254 FTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVTNRSSEGVNADRA 313

Query: 545 A--PKSGFSPKSDNCHIHEPQSAHEPVEEFRIDPMCTNCPNLPPIGYDGREEGLWLHCVR 718
           A  P +   P++++   +E  +     E+F IDPMCTNCPNL P GYDG EEGLWLHCV+
Sbjct: 314 AHSPNNCLVPENNSSDKYEDSTE----EDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQ 369

Query: 719 YSGPGWTYECPYPDWA 766
           YSG GW Y+CPYPDWA
Sbjct: 370 YSGSGWVYQCPYPDWA 385


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  373 bits (958), Expect = e-101
 Identities = 184/256 (71%), Positives = 204/256 (79%), Gaps = 1/256 (0%)
 Frame = +2

Query: 2   CKPASIPVHPCGQYRKNTVVGILQAEHELGSLFPIHRLDRLVSGLLILARNATKADIFRQ 181
           CKPAS+PVHPCGQYRKNTVVGILQAEH L  LFPIHRLDRLVSGLLILAR+A+KAD FRQ
Sbjct: 119 CKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQ 178

Query: 182 QIESGEVKKQYIARVIGVFPDNEKVANVNVNYNAREGKSTVELENGSNGKNPSKGKASCT 361
           QIE+G V+KQYIA+V GVFPD+E+V NVNVNYNAREG+STV       G  P KGK++CT
Sbjct: 179 QIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV---GNCCGNTPLKGKSACT 235

Query: 362 KFTGISTNGTQSLVLCEPITGRTHQIRVHLQYLGYPIANDMLYQSECVSNRSTEGLSADR 541
           KFT ISTNGT S+VLCEPITGRTHQIRVHLQY G+PIANDMLY SE   +RST+GLSADR
Sbjct: 236 KFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADR 295

Query: 542 AAPKSGFS-PKSDNCHIHEPQSAHEPVEEFRIDPMCTNCPNLPPIGYDGREEGLWLHCVR 718
           AA  SG S P S      +         +F IDPMCTNCPNL P GYD  EEGLWLHC+R
Sbjct: 296 AAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIR 355

Query: 719 YSGPGWTYECPYPDWA 766
           Y GP W YECP+P+WA
Sbjct: 356 YCGPDWVYECPHPEWA 371


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score =  371 bits (952), Expect = e-100
 Identities = 179/256 (69%), Positives = 209/256 (81%), Gaps = 2/256 (0%)
 Frame = +2

Query: 5   KPASIPVHPCGQYRKNTVVGILQAEHELGSLFPIHRLDRLVSGLLILARNATKADIFRQQ 184
           KPA++PVHPCGQYRKNTVVGILQAEH L  LFP+HRLDRLVSGLLILARNA KAD+FRQ+
Sbjct: 132 KPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNALKADLFRQE 191

Query: 185 IESGEVKKQYIARVIGVFPDNEKVANVNVNYNAREGKSTVELENGSNGKNPSKGKASCTK 364
           IE+G V+KQY+A+V+GVFP++E+V  VN+NYNAREG+ST E+ N S   +P KGK +CTK
Sbjct: 192 IEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGN-SCVDSPPKGKTACTK 250

Query: 365 FTGISTNGTQSLVLCEPITGRTHQIRVHLQYLGYPIANDMLYQSECVSNRSTEGLSADRA 544
           FT ISTNGT S+VLC+PITGRTHQIRVHLQY G+PIAND LY SE  ++RS EG+SADRA
Sbjct: 251 FTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADRA 310

Query: 545 APKSGF--SPKSDNCHIHEPQSAHEPVEEFRIDPMCTNCPNLPPIGYDGREEGLWLHCVR 718
           A  S +  +P+      HE  S    V++F IDPMCTNCPNL P GYD  EE LWLHCV+
Sbjct: 311 ACSSSYCVTPQDFCSDTHEENS----VQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQ 366

Query: 719 YSGPGWTYECPYPDWA 766
           YSGPGW YECPYPDWA
Sbjct: 367 YSGPGWVYECPYPDWA 382


>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  363 bits (933), Expect = 3e-98
 Identities = 179/255 (70%), Positives = 203/255 (79%)
 Frame = +2

Query: 2   CKPASIPVHPCGQYRKNTVVGILQAEHELGSLFPIHRLDRLVSGLLILARNATKADIFRQ 181
           CKPAS+PVHPCGQYRKNTVVGILQAEH L  LFP+HRLDRLVSGLLILARNA KADIFRQ
Sbjct: 130 CKPASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFRQ 189

Query: 182 QIESGEVKKQYIARVIGVFPDNEKVANVNVNYNAREGKSTVELENGSNGKNPSKGKASCT 361
           QIE+G V KQYIA+V G FP++E + + N++YNAREG+ST E+      +  +KGKA+ T
Sbjct: 190 QIEAGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEV------RGSAKGKAAST 243

Query: 362 KFTGISTNGTQSLVLCEPITGRTHQIRVHLQYLGYPIANDMLYQSECVSNRSTEGLSADR 541
           KFT ISTNGTQS+VLCEPITGRTHQIRVHLQY G+PIANDMLY SE   +RS +GLSADR
Sbjct: 244 KFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKGLSADR 303

Query: 542 AAPKSGFSPKSDNCHIHEPQSAHEPVEEFRIDPMCTNCPNLPPIGYDGREEGLWLHCVRY 721
           +A  SG S  S+       +       +F IDPMCTNCPNL P GYD  EEGLWLHC+RY
Sbjct: 304 SARISGVSLTSNFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRY 363

Query: 722 SGPGWTYECPYPDWA 766
           SGPGWTYECPYPDWA
Sbjct: 364 SGPGWTYECPYPDWA 378


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