BLASTX nr result

ID: Scutellaria24_contig00011919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011919
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   129   4e-28
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   127   1e-27
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...   115   7e-24
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...   114   1e-23

>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  129 bits (324), Expect = 4e-28
 Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 9/129 (6%)
 Frame = -3

Query: 513 YQSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFAS 334
           + SLSNIM ASMEDLARCPGIGERKVKRL+DTFHEPFKR   S+  IPE  +        
Sbjct: 264 FGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAIPETSVQNKPASPE 323

Query: 333 ESSRNDGD--------VKETHDSNKRQKKE-EISVKSALKAAFAKYSGAIGRKRNTVVLD 181
            S RN  +         ++T D +KR+KKE E++VKSAL AAFAKYSG +G++++T  ++
Sbjct: 324 SSIRNKAESSSLIEDKQEDTEDVSKRRKKEPEVTVKSALSAAFAKYSGRVGKRKSTSQVE 383

Query: 180 ETEENTVDE 154
           E EE+ + +
Sbjct: 384 EKEESIISK 392


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  127 bits (320), Expect = 1e-27
 Identities = 67/107 (62%), Positives = 84/107 (78%), Gaps = 1/107 (0%)
 Frame = -3

Query: 513 YQSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFAS 334
           + SLS+IMDASMEDLARCPGIGERKVKRLYDTFHEPFKR VPS   +PENP+  NA  +S
Sbjct: 264 FGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVPSCPAVPENPVHNNAEPSS 323

Query: 333 ESSRNDGDVKETHDSNKRQKKE-EISVKSALKAAFAKYSGAIGRKRN 196
            +   + +  +  D++KR+KKE E++VKSAL AAFA+YS  IG++ N
Sbjct: 324 VNEVVEVE-NDVEDASKRRKKEPELTVKSALSAAFAQYSEKIGKRNN 369


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 412

 Score =  115 bits (287), Expect = 7e-24
 Identities = 61/117 (52%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = -3

Query: 513 YQSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFAS 334
           + SLS+IMDASMEDLARCPGIGERKV+RLYDTFHEPFKR V +   +PE P   +    S
Sbjct: 268 FGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRS 327

Query: 333 ESSRNDGDVKETHDSNKRQKKE-EISVKSALKAAFAKYSGAIGRKRNTVVLDETEEN 166
            +   D D K   +   + KKE +++VKSAL AAFAKY+  I  K  ++  ++ +EN
Sbjct: 328 SNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAKYADKIA-KSGSIPQEKKKEN 383


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/106 (54%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
 Frame = -3

Query: 513 YQSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFAS 334
           + SLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKR V S   +P+ P+ K+   +S
Sbjct: 253 FGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPVVPQTPVQKDTEPSS 312

Query: 333 ESSRNDGDVKETHDSNKRQKKEEISVKSALKAAFAK-YSGAIGRKR 199
                + +++E + +  R+K+ E++VKSAL +AFAK  +  +G K+
Sbjct: 313 VDEVAEMEMEEANANKHRKKEPELTVKSALSSAFAKCATNKLGNKK 358


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 391

 Score =  114 bits (285), Expect = 1e-23
 Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
 Frame = -3

Query: 513 YQSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRTVPSQAPIPENPMDKNAVFAS 334
           + SLS+IMDASMEDLARCPGIGERKV+RLYDTFHEPFKR V +   +PE P   +    S
Sbjct: 269 FGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRS 328

Query: 333 ESSRNDGDVKETHDSNKRQKKE-EISVKSALKAAFAKYSGAIGRKRNTVVLDETEENTVD 157
            +   D D K   +   + KKE +++VKSAL AAFAKY+  I +  +  +  E E+   +
Sbjct: 329 SNEEQDVDGKRIEEDGSQHKKEPKLNVKSALSAAFAKYADKIAKSGS--IPQEKEKGEPE 386

Query: 156 ENHT 145
            ++T
Sbjct: 387 SSNT 390


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