BLASTX nr result

ID: Scutellaria24_contig00011854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011854
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic...   122   8e-26
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   109   7e-22
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...    94   2e-17

>ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
            gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4
            [Solanum lycopersicum]
          Length = 978

 Score =  122 bits (306), Expect = 8e-26
 Identities = 69/172 (40%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
 Frame = -3

Query: 726  PSGYDQGARRYDYNGQGYYHDDMNHFNGPYTPHAPMGNARYGIPPNDMQTNRPNFNAQDR 547
            PSG+  G           + +D ++F     P    GN RY   P + Q  R NF  QDR
Sbjct: 818  PSGHASG-----------FFEDPSYFPSNLMPRGASGNPRYAPSPYEFQNTRQNFRIQDR 866

Query: 546  YSYQEQHHDLRSSMSALTIEGGFRARPLGATSSRSASAGQLSQV--SPQLGHNTGPLPSP 373
            +SYQ+Q+H +R+ MS LTI  G R RP  + ++R  ++GQLS V   P    N GPLPSP
Sbjct: 867  HSYQDQYHSMRNEMSVLTIGSGARTRP-PSNAARMPNSGQLSNVCPPPPFTQNVGPLPSP 925

Query: 372  PPKWINKRPAGNPAMYSRQQQQNAG-----QVKVAYQVKSKPAQNIMDSQLQ 232
            P +WINK   G  AM+S+ Q+ + G     QVK  YQ+KS+P Q    ++ Q
Sbjct: 926  PLQWINKPARGATAMHSKYQETSKGPAYDKQVKQVYQIKSRPTQESPSTETQ 977


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
            predicted protein [Populus trichocarpa]
          Length = 948

 Score =  117 bits (293), Expect = 2e-24
 Identities = 67/167 (40%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
 Frame = -3

Query: 732  ARPSGYDQGARRYDYNGQGYYHDDMNHFNGPYTPHAPMGNARYGIPPNDMQTNRPNFNAQ 553
            A P+GY          G+GY  D   H+         M N  Y +  N +Q NR N   Q
Sbjct: 786  AGPAGY----------GRGYGDDPNYHYAHYNNQQGLMSNHMYPVSSNGVQGNRHNSRPQ 835

Query: 552  DRYSYQEQHHDLRSSMSALTIEGGFRARPLGATSSRSASAGQLSQVSPQLGHNTGPLPSP 373
            DR  Y +Q+HDL + +SALT+E  FR+R     S R  + G  + +  Q  HNTGPLPSP
Sbjct: 836  DRVQYHQQYHDLSTGVSALTVEENFRSRAPAVISPRIPNPGYTTNLYNQFEHNTGPLPSP 895

Query: 372  PPKWINKRPAGNPAMYSRQQQQNAG----QVKVAYQVKSKPAQNIMD 244
            P  WINK  AG+  MY RQ   + G    Q+K  YQVK++ AQ   D
Sbjct: 896  PTNWINKTAAGDAGMYFRQDTTSRGPNEKQLKQVYQVKTQVAQETSD 942


>ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|222857428|gb|EEE94975.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  112 bits (281), Expect = 6e-23
 Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
 Frame = -3

Query: 732  ARPSGYDQGARRYDYNGQGYYHDDMNHFNGPYTPHAPMGNARYGIPPNDMQTNRPNFNAQ 553
            A P+GY          G+GY+ D   H+         M N RY    N +Q+NR NF  Q
Sbjct: 797  AGPAGY----------GRGYWDDPNYHYAQHSNQQGLMSNPRYRSLSNGVQSNRHNFRTQ 846

Query: 552  DRYSYQEQHHDLRSSMSALTIEGGFRARPLGATSSRSASAGQLSQVSPQLGHNTGPLPSP 373
            D   Y +Q+H+L + +SALT+E   R+R     S R  + G    +  Q   NTG L SP
Sbjct: 847  DGVQYHQQYHNLSTGVSALTVEENIRSRAPAVISPRMPNPGNTPNLQNQAEQNTGLLSSP 906

Query: 372  PPKWINKRPAGNPAMYSRQQQQNAG----QVKVAYQVKSKPAQNIMDSQLQ 232
            P  WINK  AGN  MY +Q+  + G    QVK  YQVK++ AQ   D Q Q
Sbjct: 907  PTNWINKTAAGNTGMYFKQKSTSIGPNEKQVKQVYQVKTQVAQETPDIQAQ 957


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score =  109 bits (272), Expect = 7e-22
 Identities = 65/169 (38%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
 Frame = -3

Query: 732  ARPSGYDQGARRYDYNGQGYYHDDMNHFNGPYTPHAPMGNARYGIPPNDMQTNRPNFNAQ 553
            A PSGY++G      N   YY+   N+  G       M N R  +  N + +NR NF  Q
Sbjct: 798  AGPSGYERGYS----NDPNYYYGHHNYQQGL------MSNPRSPLFSNGVSSNRHNFRTQ 847

Query: 552  DRYSYQEQHHDLRSSMSALTIEGGFRARPLGATSSRSASAGQLSQVSPQLGHNTGPLPSP 373
            DR  Y EQ+ DL++ MSALT+E   ++RP    S R+ + G  S +  Q   N G LPSP
Sbjct: 848  DRVQYHEQYRDLKTGMSALTMEENVKSRPPAVMSQRTQNTGYSSSLQQQFEQNLGALPSP 907

Query: 372  PPKWINKRPAGNPAMYSRQQQQ----NAGQVKVAYQVKSKPAQNIMDSQ 238
            P KWI K    +  MY RQ+      N  Q K  YQVK++ AQ + + Q
Sbjct: 908  PAKWIGKATDTDAEMYFRQETMLRGANEKQAKQIYQVKTRAAQEMSNPQ 956


>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
 Frame = -3

Query: 732  ARPSGYDQGARRYDYNGQGYYHDDMNHFNGPY-TPHAPMGNARYGIPPNDMQTNRPNFNA 556
            A PSGY++G     +NG      D N++ G Y  P   +   R+   PN+MQ NR NF  
Sbjct: 786  AGPSGYEKG-----FNG------DSNYYYGHYDNPRGALSIPRFPPSPNNMQGNRQNFRV 834

Query: 555  QDRYSYQEQHHDLRS---SMSALTIEGGFRARPLGATSSRSASAGQLSQVSPQLGHNTGP 385
            QDR ++Q+Q+ + R+    MS LTIE G R R      SR  SA      + Q   N  P
Sbjct: 835  QDRSTFQDQYRNSRTGIMGMSTLTIEEGVRTRQPIVRPSRMPSAADTLNTNNQFVQNKSP 894

Query: 384  LPSPPPKWINKRPAGNPAMYSRQQQQ-NAG----QVKVAYQVKSKPAQNIMD 244
             P+PP KWI ++  GN  M  RQQ   +AG     +K  YQVK +  Q+  D
Sbjct: 895  -PAPPSKWIERQATGNAGMIVRQQDNVSAGTYEKPIKKVYQVKMQHLQDSSD 945


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