BLASTX nr result

ID: Scutellaria24_contig00011833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011833
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   179   3e-43
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              179   3e-43
ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcr...   167   1e-39
ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcr...   167   1e-39
ref|XP_002524432.1| transcription initiation factor ia, putative...   153   2e-35

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  179 bits (454), Expect = 3e-43
 Identities = 92/153 (60%), Positives = 115/153 (75%)
 Frame = -1

Query: 461 DMDVTDSELDYHVRNALKAAIQGDCDFYNQLVAVIHHKEHLATDEVALLVTCLKAVTGAV 282
           +++ +DSEL YHVR+AL++   GD D Y+QL+ V+HHKE LA DEVALLVT LKA++GAV
Sbjct: 17  EVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAV 76

Query: 281 SCIHIVHHRSLLAAIFGMSLWNYGTDVMDXXXXXXXXXXXXSGEYVDLCLEMLVLNFTPP 102
           SCI +VHH+SLL++IFGMSLWNYG DVMD            SG Y+D  L+MLV NF PP
Sbjct: 77  SCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPP 136

Query: 101 SIHQSELLKQPRGLSKKTQVLDRVHSTLKDISN 3
                + LKQPRGL++K QVL RVHSTLKDI++
Sbjct: 137 -YSLLDFLKQPRGLARKDQVLSRVHSTLKDIAD 168


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  179 bits (454), Expect = 3e-43
 Identities = 92/153 (60%), Positives = 115/153 (75%)
 Frame = -1

Query: 461 DMDVTDSELDYHVRNALKAAIQGDCDFYNQLVAVIHHKEHLATDEVALLVTCLKAVTGAV 282
           +++ +DSEL YHVR+AL++   GD D Y+QL+ V+HHKE LA DEVALLVT LKA++GAV
Sbjct: 17  EVNFSDSELVYHVRHALQSVPLGDSDSYDQLIGVLHHKERLAPDEVALLVTSLKALSGAV 76

Query: 281 SCIHIVHHRSLLAAIFGMSLWNYGTDVMDXXXXXXXXXXXXSGEYVDLCLEMLVLNFTPP 102
           SCI +VHH+SLL++IFGMSLWNYG DVMD            SG Y+D  L+MLV NF PP
Sbjct: 77  SCIDMVHHKSLLSSIFGMSLWNYGPDVMDALLELILSLAASSGNYLDCSLDMLVSNFMPP 136

Query: 101 SIHQSELLKQPRGLSKKTQVLDRVHSTLKDISN 3
                + LKQPRGL++K QVL RVHSTLKDI++
Sbjct: 137 -YSLLDFLKQPRGLARKDQVLSRVHSTLKDIAD 168


>ref|XP_004155826.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 625

 Score =  167 bits (424), Expect = 1e-39
 Identities = 85/153 (55%), Positives = 113/153 (73%)
 Frame = -1

Query: 461 DMDVTDSELDYHVRNALKAAIQGDCDFYNQLVAVIHHKEHLATDEVALLVTCLKAVTGAV 282
           D+++TD++L   +R  L +   GD D YNQLV VIHH++ L+ DEVALLVTCLKA++GAV
Sbjct: 17  DVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAV 76

Query: 281 SCIHIVHHRSLLAAIFGMSLWNYGTDVMDXXXXXXXXXXXXSGEYVDLCLEMLVLNFTPP 102
           SCI I+ H SLLAAIF MSLW+YG++VMD            +G+YVD CL+MLV NF PP
Sbjct: 77  SCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPP 136

Query: 101 SIHQSELLKQPRGLSKKTQVLDRVHSTLKDISN 3
           + +  +LLK+P GL++K +VL RVH+ LKDIS+
Sbjct: 137 NSYM-DLLKKPHGLTRKEEVLSRVHTALKDISD 168


>ref|XP_004133864.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Cucumis sativus]
          Length = 626

 Score =  167 bits (424), Expect = 1e-39
 Identities = 85/153 (55%), Positives = 113/153 (73%)
 Frame = -1

Query: 461 DMDVTDSELDYHVRNALKAAIQGDCDFYNQLVAVIHHKEHLATDEVALLVTCLKAVTGAV 282
           D+++TD++L   +R  L +   GD D YNQLV VIHH++ L+ DEVALLVTCLKA++GAV
Sbjct: 17  DVNLTDAQLVDFIRGFLSSVSLGDIDGYNQLVGVIHHRDRLSPDEVALLVTCLKALSGAV 76

Query: 281 SCIHIVHHRSLLAAIFGMSLWNYGTDVMDXXXXXXXXXXXXSGEYVDLCLEMLVLNFTPP 102
           SCI I+ H SLLAAIF MSLW+YG++VMD            +G+YVD CL+MLV NF PP
Sbjct: 77  SCIDIILHESLLAAIFKMSLWDYGSNVMDALIELIISLAVSNGKYVDSCLDMLVNNFMPP 136

Query: 101 SIHQSELLKQPRGLSKKTQVLDRVHSTLKDISN 3
           + +  +LLK+P GL++K +VL RVH+ LKDIS+
Sbjct: 137 NSYM-DLLKKPHGLTRKEEVLSRVHTALKDISD 168


>ref|XP_002524432.1| transcription initiation factor ia, putative [Ricinus communis]
           gi|223536316|gb|EEF37967.1| transcription initiation
           factor ia, putative [Ricinus communis]
          Length = 640

 Score =  153 bits (386), Expect = 2e-35
 Identities = 77/152 (50%), Positives = 107/152 (70%)
 Frame = -1

Query: 458 MDVTDSELDYHVRNALKAAIQGDCDFYNQLVAVIHHKEHLATDEVALLVTCLKAVTGAVS 279
           ++ TDS+L YHVR+AL +   GD + Y+QLV V+HH + L  D+VALL+T LKA++GAVS
Sbjct: 21  VNYTDSDLVYHVRDALHSVQYGDTNSYDQLVGVMHHSQRLTPDDVALLLTSLKALSGAVS 80

Query: 278 CIHIVHHRSLLAAIFGMSLWNYGTDVMDXXXXXXXXXXXXSGEYVDLCLEMLVLNFTPPS 99
            I   HH  LL +IFGMS+WNYG DVM+            +G+Y+D CL+MLV NF PP 
Sbjct: 81  YIDECHHDRLLQSIFGMSIWNYGPDVMEALLELIIALAASNGKYIDPCLKMLVTNFVPP- 139

Query: 98  IHQSELLKQPRGLSKKTQVLDRVHSTLKDISN 3
           ++  ++LK PRG +KK QVL R+H+ L+DI++
Sbjct: 140 MYLIDILKLPRGQAKKEQVLSRLHTALEDIAH 171


Top