BLASTX nr result

ID: Scutellaria24_contig00011708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011708
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...   146   2e-33
ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vit...   145   5e-33
emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]   145   5e-33
gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]       143   2e-32
ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like...   142   5e-32

>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/139 (51%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
 Frame = -2

Query: 483 EESEREGSIMSEEKRDSHHQH--YDXXXXXXXPYGTFQGVVNHPPP-----TAMGFXXXX 325
           E+      I+  +    HHQH            YGTFQGV N+PPP       +GF    
Sbjct: 5   EKGHSRAVIIDHQHHQYHHQHPQQSQPPPPPPQYGTFQGVANYPPPHPPQHPVIGFPQPV 64

Query: 324 XXXXXXXXXXXQYYAHGYQAVPGYAVAEGRPIREHRLPCCGIGLGWFLFITGFFLAAIPW 145
                        Y HGYQ VPGYAVAEGRP+RE RLPCCGIG+GWFLFI GFFL AIPW
Sbjct: 65  PPPGASEPPA---YPHGYQTVPGYAVAEGRPVRERRLPCCGIGVGWFLFIIGFFLGAIPW 121

Query: 144 YVGALLLCCSRVDPREKPG 88
           YVG  +L C+R+DPREKPG
Sbjct: 122 YVGLFILLCARIDPREKPG 140


>ref|XP_002268796.1| PREDICTED: 60S ribosomal protein L18a-1 [Vitis vinifera]
           gi|296082825|emb|CBI22126.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  145 bits (366), Expect = 5e-33
 Identities = 74/128 (57%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
 Frame = -2

Query: 456 MSEEKRDSHHQHYDXXXXXXXPYGTFQGVVNHPPPTAMGFXXXXXXXXXXXXXXXQ---- 289
           MSEE ++   QHY          GTFQGV  +  P A+GF                    
Sbjct: 1   MSEESKNRSDQHY----------GTFQGVPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPP 50

Query: 288 -YYAHGYQAVPGYAVAEGRPIREHRLPCCGIGLGWFLFITGFFLAAIPWYVGALLLCCSR 112
            YYAHGYQAVPGYAVAEG P+RE RLPCCGIGLGWFLFI GFFLAA+PWYVG  LL C+R
Sbjct: 51  QYYAHGYQAVPGYAVAEGTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCAR 110

Query: 111 VDPREKPG 88
           VD REKPG
Sbjct: 111 VDYREKPG 118


>emb|CAN75635.1| hypothetical protein VITISV_044171 [Vitis vinifera]
          Length = 141

 Score =  145 bits (366), Expect = 5e-33
 Identities = 74/128 (57%), Positives = 81/128 (63%), Gaps = 5/128 (3%)
 Frame = -2

Query: 456 MSEEKRDSHHQHYDXXXXXXXPYGTFQGVVNHPPPTAMGFXXXXXXXXXXXXXXXQ---- 289
           MSEE ++   QHY          GTFQGV  +  P A+GF                    
Sbjct: 1   MSEESKNRSDQHY----------GTFQGVPTYSQPPAVGFPQPVPPPGAAEPSAPPPPPP 50

Query: 288 -YYAHGYQAVPGYAVAEGRPIREHRLPCCGIGLGWFLFITGFFLAAIPWYVGALLLCCSR 112
            YYAHGYQAVPGYAVAEG P+RE RLPCCGIGLGWFLFI GFFLAA+PWYVG  LL C+R
Sbjct: 51  QYYAHGYQAVPGYAVAEGTPVRERRLPCCGIGLGWFLFIIGFFLAAVPWYVGFFLLLCAR 110

Query: 111 VDPREKPG 88
           VD REKPG
Sbjct: 111 VDYREKPG 118


>gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]
          Length = 151

 Score =  143 bits (361), Expect = 2e-32
 Identities = 72/131 (54%), Positives = 83/131 (63%), Gaps = 10/131 (7%)
 Frame = -2

Query: 450 EEKRDSH-----HQHYDXXXXXXXPYGTFQGVVNHPPP---TAMGFXXXXXXXXXXXXXX 295
           E+K D+      HQH+         YGTFQGV N+PPP     +GF              
Sbjct: 4   EDKADNRAFVVDHQHHQ--------YGTFQGVANYPPPHHQPVIGFPQPVPPPGATEPSS 55

Query: 294 XQ--YYAHGYQAVPGYAVAEGRPIREHRLPCCGIGLGWFLFITGFFLAAIPWYVGALLLC 121
               YYA+ YQ VPGYAVAEGRP+RE RLPCCGIG+GWFLFI GFFL AIPWYVG  +L 
Sbjct: 56  PLPPYYAYAYQTVPGYAVAEGRPVRERRLPCCGIGVGWFLFIIGFFLGAIPWYVGLFVLL 115

Query: 120 CSRVDPREKPG 88
           C+R+DPREKPG
Sbjct: 116 CARIDPREKPG 126


>ref|XP_004146004.1| PREDICTED: 60S ribosomal protein L18a-1-like [Cucumis sativus]
           gi|449524020|ref|XP_004169021.1| PREDICTED: 60S
           ribosomal protein L18a-1-like [Cucumis sativus]
          Length = 153

 Score =  142 bits (357), Expect = 5e-32
 Identities = 71/129 (55%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
 Frame = -2

Query: 456 MSEEKRDS------HHQHYDXXXXXXXPYGTFQGVVNHPPPTAMGFXXXXXXXXXXXXXX 295
           MSE+ + +      HH H          YGTFQGV N+PP                    
Sbjct: 1   MSEQDKSAAVGVVVHHHHESNSPHPH--YGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQ 58

Query: 294 XQYYAHGYQAVPGYAVAEGRPIREHRLPCCGIGLGWFLFITGFFLAAIPWYVGALLLCCS 115
            Q+YAHGYQAVPGYA+ EGRP+RE RLPCCGIG+GWFLFI GFFLAAIPWY GA+L+ C 
Sbjct: 59  YQHYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICG 118

Query: 114 RVDPREKPG 88
           RVD REKPG
Sbjct: 119 RVDYREKPG 127


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