BLASTX nr result

ID: Scutellaria24_contig00011627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011627
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...   246   7e-63
ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|2...   237   4e-60
ref|NP_001077760.1| Class I peptide chain release factor [Arabid...   236   6e-60
ref|XP_002886449.1| translation release factor [Arabidopsis lyra...   234   3e-59
ref|XP_002509613.1| immature colon carcinoma transcript, putativ...   230   4e-58

>ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
           vinifera] gi|296082846|emb|CBI22147.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score =  246 bits (628), Expect = 7e-63
 Identities = 136/210 (64%), Positives = 156/210 (74%)
 Frame = +3

Query: 180 MAAIRATTSSLMLARSIFRPPLPLHSQVSVRLFRAPSPLAGFVGVRLLAPTTYSAVRCDS 359
           MA IR TT+  M+ + IF   L L S+   R+F+   P        +    +YS +RC +
Sbjct: 1   MATIRCTTN--MIVKEIFHVSLSLRSE---RMFQMVLPNFSVYCGTVNRGISYSRIRCAA 55

Query: 360 TKSGGQDKKSPARLAEVQRLLHEAEERYQAAGGGAEPIPKITLDHVNVSYARSGGPGGQN 539
             SG   +K  ARL++VQ+LL EAEER  + G   EP PKITLDHV VS+ARSGGPGGQN
Sbjct: 56  ADSGDGGRKVSARLSQVQQLLQEAEERSLSFGN--EPTPKITLDHVTVSFARSGGPGGQN 113

Query: 540 VNKVNTKVDMRFNVKNAYWLSERVREKIMQTEKNRINKDGEIVISSTKTRTQKGNIEDAL 719
           VNKVNTKVDMRFNVKNAYWLS+RVRE+IMQ EKNRINKDGEIVISSTKTRTQKGNIEDAL
Sbjct: 114 VNKVNTKVDMRFNVKNAYWLSDRVRERIMQMEKNRINKDGEIVISSTKTRTQKGNIEDAL 173

Query: 720 AKLQEIIDAASYVPPPPSQETVKKIARFHA 809
            KLQ IIDAASYVPPPPS+E  KKIA+  A
Sbjct: 174 GKLQAIIDAASYVPPPPSEEQKKKIAKLAA 203


>ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|222841868|gb|EEE79415.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  237 bits (604), Expect = 4e-60
 Identities = 132/216 (61%), Positives = 154/216 (71%), Gaps = 6/216 (2%)
 Frame = +3

Query: 180 MAAIRATTSSLM---LARSIFRPPLPLHSQVSVRLFRAPSPLAGFVGVRLLAPT---TYS 341
           MA IR +T+ ++      ++  PP+P         F     L       L  P    ++S
Sbjct: 1   MAVIRTSTNMILKQVFLDNLLIPPVPS--------FSVSRTLGNLRWANLKVPNREISFS 52

Query: 342 AVRCDSTKSGGQDKKSPARLAEVQRLLHEAEERYQAAGGGAEPIPKITLDHVNVSYARSG 521
            ++C    +G  DKK  +RL++VQ+LL EAEER  AAG   EP PKITLDHV VS+ARSG
Sbjct: 53  RIKC----AGSDDKKVSSRLSQVQQLLQEAEERASAAGN--EPPPKITLDHVTVSFARSG 106

Query: 522 GPGGQNVNKVNTKVDMRFNVKNAYWLSERVREKIMQTEKNRINKDGEIVISSTKTRTQKG 701
           GPGGQNVNKVNTKVDMRFNVKNAYWLSER+RE+IMQ EKNRINKDGEIVISSTKTRTQKG
Sbjct: 107 GPGGQNVNKVNTKVDMRFNVKNAYWLSERIRERIMQMEKNRINKDGEIVISSTKTRTQKG 166

Query: 702 NIEDALAKLQEIIDAASYVPPPPSQETVKKIARFHA 809
           NI+DALAKLQ IID ASYVPPPPS+E  KKIA+  A
Sbjct: 167 NIDDALAKLQAIIDVASYVPPPPSEEQKKKIAKLAA 202


>ref|NP_001077760.1| Class I peptide chain release factor [Arabidopsis thaliana]
           gi|145326104|ref|NP_001077761.1| Class I peptide chain
           release factor [Arabidopsis thaliana]
           gi|27754314|gb|AAO22610.1| unknown protein [Arabidopsis
           thaliana] gi|28393873|gb|AAO42344.1| unknown protein
           [Arabidopsis thaliana] gi|332195891|gb|AEE34012.1| Class
           I peptide chain release factor [Arabidopsis thaliana]
           gi|332195892|gb|AEE34013.1| Class I peptide chain
           release factor [Arabidopsis thaliana]
          Length = 236

 Score =  236 bits (603), Expect = 6e-60
 Identities = 134/224 (59%), Positives = 163/224 (72%), Gaps = 10/224 (4%)
 Frame = +3

Query: 180 MAAIRATTSSLMLARSIFRPPLPLHSQVS--------VRLFRAPSPLAGFVGVRLLAPTT 335
           MAAIR  T+  M+ R     PL LHS           +RL    SP+      RL++   
Sbjct: 1   MAAIRTMTN--MILREFIHHPLLLHSSSKSCQSLLPCLRLTPLISPIHS--NSRLVS--- 53

Query: 336 YSAVRCDSTKSGGQ--DKKSPARLAEVQRLLHEAEERYQAAGGGAEPIPKITLDHVNVSY 509
              VRC ++ SGG   D+K  +RL++VQ++LHEAEER  +AG   EP P+ITLD+V +++
Sbjct: 54  ---VRCAASTSGGSGGDRKVSSRLSQVQQMLHEAEERASSAGN--EPTPQITLDNVTLNF 108

Query: 510 ARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSERVREKIMQTEKNRINKDGEIVISSTKTR 689
           ARSGGPGGQNVNK+NTKVDMRFNVKNAYWLS+R+REKI+ TEKNRINKDGE+VISSTKTR
Sbjct: 109 ARSGGPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKILLTEKNRINKDGELVISSTKTR 168

Query: 690 TQKGNIEDALAKLQEIIDAASYVPPPPSQETVKKIARFHASADD 821
           TQKGNI+DAL KLQ IIDAASYVPPPPS+E  KKI +  A AD+
Sbjct: 169 TQKGNIDDALEKLQAIIDAASYVPPPPSEEQKKKIVKLAAKADN 212


>ref|XP_002886449.1| translation release factor [Arabidopsis lyrata subsp. lyrata]
           gi|297332290|gb|EFH62708.1| translation release factor
           [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score =  234 bits (597), Expect = 3e-59
 Identities = 130/220 (59%), Positives = 160/220 (72%), Gaps = 6/220 (2%)
 Frame = +3

Query: 180 MAAIRATTSSLMLARSIFRPPLPLHSQVSVRLFRAPSPLAGFVGVRLLAP----TTYSAV 347
           MAAIR  T+  M+ R     PL LHS          S L       L+AP    + + ++
Sbjct: 1   MAAIRTMTN--MILREFSHHPLLLHSSSK----SCQSLLPCLRLTPLIAPIHSNSRFGSI 54

Query: 348 RCDSTKSGGQ--DKKSPARLAEVQRLLHEAEERYQAAGGGAEPIPKITLDHVNVSYARSG 521
           RC ++ SGG   D+K  +RL++VQ++LHEAEER  +AG   EP P+ITLDHV +++ARSG
Sbjct: 55  RCVASTSGGSNGDRKVSSRLSQVQQMLHEAEERANSAGN--EPTPQITLDHVTLNFARSG 112

Query: 522 GPGGQNVNKVNTKVDMRFNVKNAYWLSERVREKIMQTEKNRINKDGEIVISSTKTRTQKG 701
           GPGGQNVNK+NTKVDMRFNVKNAYWLS+R+REKI+  EKNRINKDGE+VISSTKTRTQKG
Sbjct: 113 GPGGQNVNKLNTKVDMRFNVKNAYWLSDRIREKIILKEKNRINKDGELVISSTKTRTQKG 172

Query: 702 NIEDALAKLQEIIDAASYVPPPPSQETVKKIARFHASADD 821
           NI+DAL KLQ II+AASYVPPPPS+E  KKI +    AD+
Sbjct: 173 NIDDALEKLQAIINAASYVPPPPSEEQKKKIVKLAEKADN 212


>ref|XP_002509613.1| immature colon carcinoma transcript, putative [Ricinus communis]
           gi|223549512|gb|EEF51000.1| immature colon carcinoma
           transcript, putative [Ricinus communis]
          Length = 234

 Score =  230 bits (587), Expect = 4e-58
 Identities = 119/159 (74%), Positives = 134/159 (84%)
 Frame = +3

Query: 333 TYSAVRCDSTKSGGQDKKSPARLAEVQRLLHEAEERYQAAGGGAEPIPKITLDHVNVSYA 512
           ++S +RC    +   DKK  ARL++VQ+LL EAEE  QA   G EP PKITLDHV VS+A
Sbjct: 55  SFSRIRC----AASDDKKVSARLSQVQQLLQEAEE--QAISAGNEPPPKITLDHVTVSFA 108

Query: 513 RSGGPGGQNVNKVNTKVDMRFNVKNAYWLSERVREKIMQTEKNRINKDGEIVISSTKTRT 692
           RSGGPGGQNVNKVNTKVDMRFNVK+AYWLS+R+R++IMQ EKNRINKDGEIVISSTKTRT
Sbjct: 109 RSGGPGGQNVNKVNTKVDMRFNVKDAYWLSDRIRDRIMQMEKNRINKDGEIVISSTKTRT 168

Query: 693 QKGNIEDALAKLQEIIDAASYVPPPPSQETVKKIARFHA 809
           QKGNIEDALAKLQ IIDAASYVPPPPS+E  KKIA+  A
Sbjct: 169 QKGNIEDALAKLQAIIDAASYVPPPPSEEQKKKIAKLAA 207


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