BLASTX nr result

ID: Scutellaria24_contig00011453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011453
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   189   1e-45
ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-a...   189   2e-45
ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-a...   189   2e-45
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   188   3e-45
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...   188   3e-45

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
            [Vitis vinifera] gi|147774905|emb|CAN61706.1|
            hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  189 bits (480), Expect = 1e-45
 Identities = 104/162 (64%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
 Frame = -3

Query: 1169 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK-EEREDRRTLG 993
            LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K EERE+RRTLG
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLG 69

Query: 992  LVLLRGEEVISLTVEGPPPPDDSRLKTTSASXXXXXXXXXXXXXXXXXXPLSQAQXXXXX 813
            LVLLRGEEVIS+TVEGPPPP++SR K   A+                  PL QAQ     
Sbjct: 70   LVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLAG 129

Query: 812  XXXXXXXXXXGMMQPQISRP--PQISVAPVSYPQQPQVVRPP 693
                      GMMQPQISRP  PQ+S  P++YP  P V+RPP
Sbjct: 130  PVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAP-VIRPP 170


>ref|XP_003545031.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Glycine max]
          Length = 281

 Score =  189 bits (479), Expect = 2e-45
 Identities = 103/164 (62%), Positives = 113/164 (68%), Gaps = 5/164 (3%)
 Frame = -3

Query: 1169 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKE----EREDRR 1002
            LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K     +REDRR
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPAEGGDREDRR 69

Query: 1001 TLGLVLLRGEEVISLTVEGPPPPDDSRLKTTSASXXXXXXXXXXXXXXXXXXPLSQAQXX 822
            TLGLVLLRGEEVIS+TVEGPPPP++SR K   A+                  P+ QAQ  
Sbjct: 70   TLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPAPVVQAQPG 129

Query: 821  XXXXXXXXXXXXXGMMQPQISRPPQISVAPVSYP-QQPQVVRPP 693
                         GMMQPQISRPPQ++  PVSYP   P V+RPP
Sbjct: 130  LAGPVRGMGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMRPP 173


>ref|XP_003519562.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Glycine max]
          Length = 282

 Score =  189 bits (479), Expect = 2e-45
 Identities = 103/164 (62%), Positives = 113/164 (68%), Gaps = 5/164 (3%)
 Frame = -3

Query: 1169 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK----EEREDRR 1002
            LQYINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K     +REDRR
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPAEGADREDRR 69

Query: 1001 TLGLVLLRGEEVISLTVEGPPPPDDSRLKTTSASXXXXXXXXXXXXXXXXXXPLSQAQXX 822
            TLGLVLLRGEEVIS+TVEGPPPP++SR K   A+                  P+ QAQ  
Sbjct: 70   TLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPAPVVQAQPG 129

Query: 821  XXXXXXXXXXXXXGMMQPQISRPPQISVAPVSYP-QQPQVVRPP 693
                         GMMQPQISRPPQ++  PVSYP   P V+RPP
Sbjct: 130  LAGPVRGVGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMRPP 173


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
            communis] gi|223530625|gb|EEF32501.1| small nuclear
            ribonucleoprotein-associated protein, putative [Ricinus
            communis]
          Length = 275

 Score =  188 bits (477), Expect = 3e-45
 Identities = 105/163 (64%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
 Frame = -3

Query: 1169 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK--EEREDRRTL 996
            LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10   LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 995  GLVLLRGEEVISLTVEGPPPPDDSRLKTTSASXXXXXXXXXXXXXXXXXXPLSQAQXXXX 816
            GLVLLRGEEVIS+TVEGPPP ++SR K  SA+                  PL QAQ    
Sbjct: 70   GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 815  XXXXXXXXXXXGMMQPQISRP--PQISVAPVSYPQQPQVVRPP 693
                       GMMQPQISRP  PQ+S  P+SYP  P V+RPP
Sbjct: 130  GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYP--PPVIRPP 170


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
            communis] gi|223530623|gb|EEF32499.1| small nuclear
            ribonucleoprotein-associated protein, putative [Ricinus
            communis]
          Length = 275

 Score =  188 bits (477), Expect = 3e-45
 Identities = 105/163 (64%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
 Frame = -3

Query: 1169 LQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSK--EEREDRRTL 996
            LQ+INYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPP KG K  EEREDRRTL
Sbjct: 10   LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 995  GLVLLRGEEVISLTVEGPPPPDDSRLKTTSASXXXXXXXXXXXXXXXXXXPLSQAQXXXX 816
            GLVLLRGEEVIS+TVEGPPP ++SR K  SA+                  PL QAQ    
Sbjct: 70   GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 815  XXXXXXXXXXXGMMQPQISRP--PQISVAPVSYPQQPQVVRPP 693
                       GMMQPQISRP  PQ+S  P+SYP  P V+RPP
Sbjct: 130  GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYP--PPVIRPP 170


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