BLASTX nr result
ID: Scutellaria24_contig00011430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00011430
(1637 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 817 0.0
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2... 784 0.0
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 766 0.0
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t... 749 0.0
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi... 745 0.0
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 738
Score = 817 bits (2111), Expect = 0.0
Identities = 388/544 (71%), Positives = 464/544 (85%), Gaps = 1/544 (0%)
Frame = +3
Query: 9 RDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEM 188
RDAVSFTALITGY +G +D AR LF EIPVRD VSWNAMI+GYAQ G ++ AL+ FQEM
Sbjct: 196 RDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255
Query: 189 MKEKVTPNPSTLLSVLSASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGNL 368
+ V PN ST+++VLSA A GS+E G+WVRSWIE+HG SNL+L+NA+IDMY+KCG+L
Sbjct: 256 KRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDL 315
Query: 369 KMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIPAC 548
ARDLF+ + EKDI+SWNVMIGGY+HM+ YKEAL +FR +Q +NVEPNDVTF++++PAC
Sbjct: 316 DKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPAC 375
Query: 549 ANLGALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEAAKQVFHGLHTKSLASW 728
A LGALDLG WIH YI+K + N +LWTSLI+MYAKCGN+EAAKQVF G+ KSL SW
Sbjct: 376 AYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435
Query: 729 NAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLVDLGREIFNS-I 905
NAMISGLAMHG A+ A++LF +M EG +PD+ITFVGVLSAC H+GLV+LGR+ F+S +
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEG-FEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494
Query: 906 RDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILGACRIHKNLELA 1085
D++ISP+LQHYGCMIDLLGRAGLF+EA L++ MEM PDGAIWGS+LGACR+H N+EL
Sbjct: 495 EDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELG 554
Query: 1086 EYAAKTLFELEPDNPGNYILLSNAYAGAGRWDEVARIRTFLNDKGMKKVPGSTSIEVDGI 1265
E+AAK LFELEP+NPG Y+LLSN YA AGRWD+VARIRT LNDKGMKKVPG +SIEVD +
Sbjct: 555 EFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSV 614
Query: 1266 VHEFLVSDRTHQKSDEIYRMLEEVDKALEKAGHVPDTSEVYYDVDQEWKEGVLCEHSEKL 1445
VHEFLV D+ H++S +IY+ML+E+D+ LEKAGHVPDTSEV YD+D+EWKEG L HSEKL
Sbjct: 615 VHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKL 674
Query: 1446 AIAYGLISTAPGTTLRIVKNLRVCGNCHAATKLISKIYNREIIARDRCRFHHFKDGHCSC 1625
AIA+GLIST P TT+RIVKNLRVCGNCH+A KLISKI+NREIIARDR RFHHFKDG CSC
Sbjct: 675 AIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSC 734
Query: 1626 MDYW 1637
MDYW
Sbjct: 735 MDYW 738
Score = 174 bits (442), Expect = 5e-41
Identities = 111/375 (29%), Positives = 186/375 (49%), Gaps = 32/375 (8%)
Frame = +3
Query: 57 GYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEMMKEKVTPNPSTLLSVL 236
G + A LF I + WN MI G + A+ + M+ V PN T +L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 237 SASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGNLKM-------------- 374
+ A +G+ + G + + + G +S+ + ++I+MYA+ G L
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAV 199
Query: 375 -----------------ARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNN 503
AR LF+ + +D VSWN MI GY ++EAL F+ ++ N
Sbjct: 200 SFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN 259
Query: 504 VEPNDVTFLNVIPACANLGALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEAA 683
V PN+ T + V+ ACA G+L+LGNW+ +IE H N L +LI+MY+KCG+L+ A
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDH-GLGSNLRLVNALIDMYSKCGDLDKA 318
Query: 684 KQVFHGLHTKSLASWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCH 863
+ +F G+ K + SWN MI G + +A+ LF +M ++ +V+P+++TFV +L AC +
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKM-QQSNVEPNDVTFVSILPACAY 377
Query: 864 SGLVDLGREIFNSIRDHNIS-PQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWG 1040
G +DLG+ I I + + +ID+ + G E A ++ M+ G+ W
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS-WN 436
Query: 1041 SILGACRIHKNLELA 1085
+++ +H + +A
Sbjct: 437 AMISGLAMHGHANMA 451
>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
predicted protein [Populus trichocarpa]
Length = 736
Score = 784 bits (2025), Expect = 0.0
Identities = 375/546 (68%), Positives = 458/546 (83%), Gaps = 3/546 (0%)
Frame = +3
Query: 9 RDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEM 188
RDAVSFTALITGY +KG++D+ARELF+EIPVRDVVSWNAMISGYAQ G + A++ F+EM
Sbjct: 192 RDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM 251
Query: 189 MKEKVTPNPSTLLSVLSASAHLGS-IETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGN 365
+ KVTPN ST+LSVLSA A GS ++ G+WVRSWIE+ G SN++L+N +IDMY KCG+
Sbjct: 252 RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGD 311
Query: 366 LKMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIPA 545
L+ A +LF+ +Q+K++VSWNVMIGGYTHMS YKEAL +FR + +N++PNDVTFL+++PA
Sbjct: 312 LEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPA 371
Query: 546 CANLGALDLGNWIHIYIEKHYQKFPNET-LWTSLINMYAKCGNLEAAKQVFHGLHTKSLA 722
CANLGALDLG W+H Y++K+ + N LWTSLI+MYAKCG+L AK++F ++TKSLA
Sbjct: 372 CANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA 431
Query: 723 SWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLVDLGREIFNS 902
+WNAMISG AMHG D A+ LFS M EG V PD+ITFVGVL+AC H+GL+ LGR F+S
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFV-PDDITFVGVLTACKHAGLLSLGRRYFSS 490
Query: 903 -IRDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILGACRIHKNLE 1079
I+D+ +SP+L HYGCMIDL GRAGLF+EA L++ MEM PDGAIW S+LGACRIH+ +E
Sbjct: 491 MIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIE 550
Query: 1080 LAEYAAKTLFELEPDNPGNYILLSNAYAGAGRWDEVARIRTFLNDKGMKKVPGSTSIEVD 1259
LAE AK LFELEP+NP Y+LLSN YAGAGRW++VA+IRT LND MKKVPG +SIEVD
Sbjct: 551 LAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVD 610
Query: 1260 GIVHEFLVSDRTHQKSDEIYRMLEEVDKALEKAGHVPDTSEVYYDVDQEWKEGVLCEHSE 1439
+VHEFLV D+ H +S+EIY+ML+E+D LEKAG VPDTSEV YD+D+EWKEGVL HSE
Sbjct: 611 SVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSE 670
Query: 1440 KLAIAYGLISTAPGTTLRIVKNLRVCGNCHAATKLISKIYNREIIARDRCRFHHFKDGHC 1619
KLAIA+GLIST PGTT+RI+KNLRVCGNCH+ATKLISKI+NREIIARDR RFHHFKDG C
Sbjct: 671 KLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSC 730
Query: 1620 SCMDYW 1637
SC DYW
Sbjct: 731 SCKDYW 736
Score = 152 bits (383), Expect = 3e-34
Identities = 107/378 (28%), Positives = 173/378 (45%), Gaps = 35/378 (9%)
Frame = +3
Query: 57 GYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEMMKEKVTPNPSTLLSVL 236
G + A LF I + V WN MI G + AL + M+ PN T S+
Sbjct: 76 GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135
Query: 237 SASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGN----------------- 365
+ + G V + + + G + N + ++I+MYA+ G
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 366 --------------LKMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNN 503
L AR+LFD + +D+VSWN MI GY +EA+ F ++
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 504 VEPNDVTFLNVIPACANLG-ALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEA 680
V PN T L+V+ ACA G +L LGNW+ +IE N L LI+MY KCG+LE
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR-GLGSNIRLVNGLIDMYVKCGDLEE 314
Query: 681 AKQVFHGLHTKSLASWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACC 860
A +F + K++ SWN MI G +A+ LF M + ++ P+++TF+ +L AC
Sbjct: 315 ASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRM-MQSNIDPNDVTFLSILPACA 373
Query: 861 HSGLVDLGREIFNSIRDHNISPQ---LQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGA 1031
+ G +DLG+ + ++ D N+ + + +ID+ + G A + + M A
Sbjct: 374 NLGALDLGKWV-HAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNT-KSLA 431
Query: 1032 IWGSILGACRIHKNLELA 1085
W +++ +H + + A
Sbjct: 432 TWNAMISGFAMHGHTDTA 449
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Cucumis sativus] gi|449529868|ref|XP_004171920.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 766 bits (1978), Expect = 0.0
Identities = 364/546 (66%), Positives = 456/546 (83%), Gaps = 1/546 (0%)
Frame = +3
Query: 3 NYRDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQ 182
N+RDA+SFTALI GY GY+D+AR+LF+E+PV+DVVSWNAMI+GYAQ+G AL LF+
Sbjct: 191 NFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFE 250
Query: 183 EMMKEKVTPNPSTLLSVLSASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCG 362
+M K V PN ST++SVLSA A +++ G+ +RSWIE+ G SNLKL+NA+IDMY+KCG
Sbjct: 251 DMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG 310
Query: 363 NLKMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIP 542
+L+ AR+LFD + E+D++SWNVMIGGYTHM YKEAL +FR + + VEP ++TFL+++P
Sbjct: 311 DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILP 370
Query: 543 ACANLGALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEAAKQVFHGLHTKSLA 722
+CA+LGA+DLG WIH YI K++ + +L TSLI++YAKCGN+ AA+QVF G+ KSLA
Sbjct: 371 SCAHLGAIDLGKWIHAYINKNFNSV-STSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA 429
Query: 723 SWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLVDLGREIFNS 902
SWNAMI GLAMHG+ADKA +LFS+M+ +G ++P+EITFVG+LSAC H+GLVDLG++ F+S
Sbjct: 430 SWNAMICGLAMHGQADKAFELFSKMSSDG-IEPNEITFVGILSACKHAGLVDLGQQFFSS 488
Query: 903 -IRDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILGACRIHKNLE 1079
++D+ ISP+ QHYGCMIDLLGRAGLFEEA L++ ME+ PDGAIWGS+LGACR H +E
Sbjct: 489 MVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVE 548
Query: 1080 LAEYAAKTLFELEPDNPGNYILLSNAYAGAGRWDEVARIRTFLNDKGMKKVPGSTSIEVD 1259
L E A+ LFELEPDNPG Y+LLSN YAGAG+WD+VARIRT LND+GMKKVPG T+IEVD
Sbjct: 549 LGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVD 608
Query: 1260 GIVHEFLVSDRTHQKSDEIYRMLEEVDKALEKAGHVPDTSEVYYDVDQEWKEGVLCEHSE 1439
+VHEFLV D+ H +S++IYRMLEEVD+ L+ G V DTSEV YD+D+EWKEG L HSE
Sbjct: 609 NVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSE 668
Query: 1440 KLAIAYGLISTAPGTTLRIVKNLRVCGNCHAATKLISKIYNREIIARDRCRFHHFKDGHC 1619
KLAIA+GLIST PGT +RI+KNLRVC NCH+ATKLISKI+NREIIARDR RFHHFKDG C
Sbjct: 669 KLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSC 728
Query: 1620 SCMDYW 1637
SC DYW
Sbjct: 729 SCNDYW 734
Score = 179 bits (454), Expect = 2e-42
Identities = 119/374 (31%), Positives = 182/374 (48%), Gaps = 31/374 (8%)
Frame = +3
Query: 57 GYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEMMKEKVTPNPSTLLSVL 236
G + A LFN I ++ WN+MI G + AL F M+ V PN T +L
Sbjct: 77 GDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136
Query: 237 SASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGNLK--------------- 371
+ A L S G + + + + G S++ + ++I+MYA+ G +
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAI 196
Query: 372 ----------------MARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNN 503
AR LFD + KD+VSWN MI GY M KEAL +F ++ N
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN 256
Query: 504 VEPNDVTFLNVIPACANLGALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEAA 683
V PN+ T ++V+ ACA ALDLGN + +IE N L +LI+MY+KCG+L+ A
Sbjct: 257 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDR-GLCSNLKLVNALIDMYSKCGDLQTA 315
Query: 684 KQVFHGLHTKSLASWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCH 863
+++F + + + SWN MI G +A+ LF EM G V+P EITF+ +L +C H
Sbjct: 316 RELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG-VEPTEITFLSILPSCAH 374
Query: 864 SGLVDLGREIFNSIRDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGS 1043
G +DLG+ I I + S +IDL + G A ++ + M++ A W +
Sbjct: 375 LGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKI-KSLASWNA 433
Query: 1044 ILGACRIHKNLELA 1085
++ +H + A
Sbjct: 434 MICGLAMHGQADKA 447
Score = 124 bits (312), Expect = 6e-26
Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 34/299 (11%)
Frame = +3
Query: 258 SIETGHWVRSWIEEHGHDSNLKLLNAMIDMYA--KCGNLKMARDLFDALQEKDIVSWNVM 431
SI T + + I + G + L L+ +I+ A + G++ A LF++++E ++ WN M
Sbjct: 41 SIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSM 100
Query: 432 IGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIPACANLGALDLGNWIHIYIEKHYQ 611
I G + AL F + + VEPN TF ++ +CA L + G IH ++ K
Sbjct: 101 IRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLK--L 158
Query: 612 KFPNET-LWTSLINMYAKCGN-------------------------------LEAAKQVF 695
F ++ + TSLINMYA+ G ++ A+Q+F
Sbjct: 159 GFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF 218
Query: 696 HGLHTKSLASWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLV 875
+ K + SWNAMI+G A G + +A+ LF +M K +V P+E T V VLSAC S +
Sbjct: 219 DEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK-ANVPPNESTIVSVLSACAQSNAL 277
Query: 876 DLGREIFNSIRDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILG 1052
DLG + + I D + L+ +ID+ + G + A EL + M + D W ++G
Sbjct: 278 DLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMIG 335
>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 738
Score = 749 bits (1933), Expect = 0.0
Identities = 354/544 (65%), Positives = 439/544 (80%), Gaps = 1/544 (0%)
Frame = +3
Query: 9 RDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEM 188
RDAVSFTALITGYV++G +D AR LF+EIPV+DVVSWNAMISGY Q G ++ A+ F EM
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM 254
Query: 189 MKEKVTPNPSTLLSVLSASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGNL 368
+ V PN ST++ VLSA H S E G W+ SW+ ++G SNL+L NA+IDMY KCG
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGET 314
Query: 369 KMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIPAC 548
+AR+LFD ++EKD++SWN MIGGY+++S Y+EAL +F ++ +NV+PNDVTFL ++ AC
Sbjct: 315 DIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHAC 374
Query: 549 ANLGALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEAAKQVFHGLHTKSLASW 728
A LGALDLG W+H YI+K+ + N +LWTSLI+MYAKCG +EAA++VF +H+++LASW
Sbjct: 375 ACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASW 434
Query: 729 NAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLVDLGREIFNS-I 905
NAM+SG AMHG A++A+ LFSEM +G +PD+ITFVGVLSAC +GLVDLG + F S I
Sbjct: 435 NAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMI 494
Query: 906 RDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILGACRIHKNLELA 1085
+D+ ISP+LQHYGCMIDLL RA FEEA L++ MEM PDGAIWGS+L AC+ H +E
Sbjct: 495 QDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFG 554
Query: 1086 EYAAKTLFELEPDNPGNYILLSNAYAGAGRWDEVARIRTFLNDKGMKKVPGSTSIEVDGI 1265
EY A+ LF+LEP+N G ++LLSN YAGAGRWD+VARIRT LNDKGMKKVPG TSIE+DG
Sbjct: 555 EYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGD 614
Query: 1266 VHEFLVSDRTHQKSDEIYRMLEEVDKALEKAGHVPDTSEVYYDVDQEWKEGVLCEHSEKL 1445
VHEFLV D+ H + + IY+ML EVDK LE+ G VP+TSEV YD+D+EWKEG L +HSEKL
Sbjct: 615 VHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKL 674
Query: 1446 AIAYGLISTAPGTTLRIVKNLRVCGNCHAATKLISKIYNREIIARDRCRFHHFKDGHCSC 1625
AI++GLI T PGTT+RIVKNLRVCGNCH+ATKLISKI+NREIIARDR RFHHFKDG CSC
Sbjct: 675 AISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSC 734
Query: 1626 MDYW 1637
D W
Sbjct: 735 NDCW 738
Score = 150 bits (380), Expect = 7e-34
Identities = 103/360 (28%), Positives = 168/360 (46%), Gaps = 33/360 (9%)
Frame = +3
Query: 105 DVVSWNAMISGYAQVGEYDNALSLFQEMMKEKVTPNPSTLLSVLSASAHLGSIETGHWVR 284
+V WN++I GY+ ++L LF M+ V PN T + + + G +
Sbjct: 95 NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLH 154
Query: 285 SWIEEHGHDSNLKLLNAMIDMYAKCGNLKM------------------------------ 374
+ + N + ++I MYA G +
Sbjct: 155 AHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLD 214
Query: 375 -ARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIPACA 551
AR LFD + KD+VSWN MI GY ++EA+ F +Q NV PN T + V+ AC
Sbjct: 215 DARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACG 274
Query: 552 NLGALDLGNWIHIYIEKHYQKFPNETLWTSLINMYAKCGNLEAAKQVFHGLHTKSLASWN 731
+ + +LG WI ++ + N L +LI+MY KCG + A+++F G+ K + SWN
Sbjct: 275 HTRSGELGKWIGSWVRDN-GFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWN 333
Query: 732 AMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLVDLGREIFNSIRD 911
MI G + ++A+ LF M + +V+P+++TF+G+L AC G +DLG+ + I D
Sbjct: 334 TMIGGYSYLSLYEEALALFEVMLR-SNVKPNDVTFLGILHACACLGALDLGKWVHAYI-D 391
Query: 912 HNI--SPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILGACRIHKNLELA 1085
N+ S + +ID+ + G E A + M + A W ++L +H + E A
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH-SRNLASWNAMLSGFAMHGHAERA 450
Score = 84.3 bits (207), Expect = 8e-14
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 15/282 (5%)
Frame = +3
Query: 3 NYRDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQ 182
N +A +T+LI Y G ++ A +F + R++ SWNAM+SG+A G + AL+LF
Sbjct: 396 NSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFS 455
Query: 183 EMM-KEKVTPNPSTLLSVLSASAHLGSIETGH-WVRSWIEEHGHDSNLKLLNAMIDMYAK 356
EM+ K P+ T + VLSA G ++ GH + RS I+++G L+ MID+ A+
Sbjct: 456 EMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLAR 515
Query: 357 CGNLKMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNV 536
+ +E +I+ N+ +EP+ + ++
Sbjct: 516 A----------EKFEEAEILMKNM------------------------EMEPDGAIWGSL 541
Query: 537 IPACANLGALDLGNWIHIYIEKHYQKFP-NETLWTSLINMYAKCGNLEAAKQVFHGLHTK 713
+ AC G ++ G ++ E+ +Q P N + L N+YA G + ++ L+ K
Sbjct: 542 LSACKAHGRVEFGEYV---AERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDK 598
Query: 714 SL------------ASWNAMISGLAMHGEADKAIKLFSEMAK 803
+ + + G H E + K+ +E+ K
Sbjct: 599 GMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDK 640
>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Glycine max]
Length = 736
Score = 745 bits (1924), Expect = 0.0
Identities = 355/547 (64%), Positives = 440/547 (80%), Gaps = 4/547 (0%)
Frame = +3
Query: 9 RDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQEM 188
RDAVSFTALITGYV++G+VD AR LF+EIP +DVVSWNAMI+GY Q G ++ AL+ F M
Sbjct: 191 RDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM 250
Query: 189 MKEKVTPNPSTLLSVLSASAHLGSIETGHWVRSWIEEHGHDSNLKLLNAMIDMYAKCGNL 368
+ V+PN ST++SVLSA HL S+E G W+ SW+ + G NL+L+NA++DMY+KCG +
Sbjct: 251 QEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEI 310
Query: 369 KMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVIPAC 548
AR LFD +++KD++ WN MIGGY H+S Y+EAL +F ++ NV PNDVTFL V+PAC
Sbjct: 311 GTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC 370
Query: 549 ANLGALDLGNWIHIYIEKHYQ---KFPNETLWTSLINMYAKCGNLEAAKQVFHGLHTKSL 719
A+LGALDLG W+H YI+K+ + N +LWTS+I MYAKCG +E A+QVF + ++SL
Sbjct: 371 ASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSL 430
Query: 720 ASWNAMISGLAMHGEADKAIKLFSEMAKEGSVQPDEITFVGVLSACCHSGLVDLGREIFN 899
ASWNAMISGLAM+G A++A+ LF EM EG QPD+ITFVGVLSAC +G V+LG F+
Sbjct: 431 ASWNAMISGLAMNGHAERALGLFEEMINEG-FQPDDITFVGVLSACTQAGFVELGHRYFS 489
Query: 900 SI-RDHNISPQLQHYGCMIDLLGRAGLFEEAMELIEQMEMGPDGAIWGSILGACRIHKNL 1076
S+ +D+ ISP+LQHYGCMIDLL R+G F+EA L+ MEM PDGAIWGS+L ACRIH +
Sbjct: 490 SMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQV 549
Query: 1077 ELAEYAAKTLFELEPDNPGNYILLSNAYAGAGRWDEVARIRTFLNDKGMKKVPGSTSIEV 1256
E EY A+ LFELEP+N G Y+LLSN YAGAGRWD+VA+IRT LNDKGMKKVPG TSIE+
Sbjct: 550 EFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEI 609
Query: 1257 DGIVHEFLVSDRTHQKSDEIYRMLEEVDKALEKAGHVPDTSEVYYDVDQEWKEGVLCEHS 1436
DG+VHEFLV D+ H +S+ I+RML+EVD+ LE+ G VPDTSEV YD+D+EWKEG L +HS
Sbjct: 610 DGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHS 669
Query: 1437 EKLAIAYGLISTAPGTTLRIVKNLRVCGNCHAATKLISKIYNREIIARDRCRFHHFKDGH 1616
EKLAIA+GLIST PG+T+RIVKNLRVC NCH+ATKLISKI+NREIIARDR RFHHFKDG
Sbjct: 670 EKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGF 729
Query: 1617 CSCMDYW 1637
CSC D W
Sbjct: 730 CSCNDRW 736
Score = 99.4 bits (246), Expect = 2e-18
Identities = 81/321 (25%), Positives = 141/321 (43%), Gaps = 33/321 (10%)
Frame = +3
Query: 363 NLKMARDLFDAL--QEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNV 536
+L A LF ++ Q +I WN +I ++ +L +F + + + PN TF ++
Sbjct: 74 DLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSL 133
Query: 537 IPACANLGALDLGNWIH-------IYIEKHYQK------------------FPNETL--- 632
+CA A +H +++ H F TL
Sbjct: 134 FKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDA 193
Query: 633 --WTSLINMYAKCGNLEAAKQVFHGLHTKSLASWNAMISGLAMHGEADKAIKLFSEMAKE 806
+T+LI Y G+++ A+++F + K + SWNAMI+G G ++A+ F+ M +E
Sbjct: 194 VSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRM-QE 252
Query: 807 GSVQPDEITFVGVLSACCHSGLVDLGREIFNSIRDHNISPQLQHYGCMIDLLGRAGLFEE 986
V P++ T V VLSAC H ++LG+ I + +RD LQ ++D+ + G
Sbjct: 253 ADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGT 312
Query: 987 AMELIEQMEMGPDGAIWGSILGA-CRIHKNLELAEYAAKTLFELEPDNPGNYILLSNAYA 1163
A +L + ME D +W +++G C + E L E N ++ + A A
Sbjct: 313 ARKLFDGME-DKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACA 371
Query: 1164 GAGRWDEVARIRTFLNDKGMK 1226
G D + ++ DK +K
Sbjct: 372 SLGALDLGKWVHAYI-DKNLK 391
Score = 84.0 bits (206), Expect = 1e-13
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Frame = +3
Query: 3 NYRDAVSFTALITGYVTKGYVDKARELFNEIPVRDVVSWNAMISGYAQVGEYDNALSLFQ 182
N + +T++I Y G V+ A ++F + R + SWNAMISG A G + AL LF+
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454
Query: 183 EMMKEKVTPNPSTLLSVLSASAHLGSIETGH-WVRSWIEEHGHDSNLKLLNAMIDMYAKC 359
EM+ E P+ T + VLSA G +E GH + S +++G L+ MID+ A+
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARS 514
Query: 360 GNLKMARDLFDALQEKDIVSWNVMIGGYTHMSEYKEALQVFRLLQLNNVEPNDVTFLNVI 539
G A+ L ++ +EP+ + +++
Sbjct: 515 GKFDEAKVLMGNME----------------------------------MEPDGAIWGSLL 540
Query: 540 PACANLGALDLGNWIHIYIEKHYQKFP-NETLWTSLINMYAKCGNLEAAKQVFHGLHTKS 716
AC G ++ G ++ E+ ++ P N + L N+YA G + ++ L+ K
Sbjct: 541 NACRIHGQVEFGEYV---AERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKG 597
Query: 717 L 719
+
Sbjct: 598 M 598