BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011359
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly...    76   4e-12
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar...    76   4e-12
gb|ABF59161.1| unknown protein [Arabidopsis thaliana]                  76   4e-12
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi...    76   4e-12

>ref|XP_002314482.1| predicted protein [Populus trichocarpa] gi|222863522|gb|EEF00653.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/100 (44%), Positives = 64/100 (64%)
 Frame = +3

Query: 27  SIISICKSLGDFRLSHQRCSDVLDVFYKFAEWPNMVTILNRLNGSIVEGRRILAEPAPVF 206
           ++++ICKS G       R  ++ DV++K  EWPNM+ ILN LNG   +G R +A+PA +F
Sbjct: 593 NVLTICKSFGKLWRMKLRHENIADVYFKIDEWPNMLNILNSLNGLEADGSRWVAQPASIF 652

Query: 207 PPDVFLALWHHPEGRKHLEATAQVLLHKSSDPSDLALLEN 326
           PP +  ALW+HP+ R+H+ ++ Q LL K   P D A L N
Sbjct: 653 PPIILQALWNHPDERRHVISSMQCLLKKLEHPMDTAELNN 692


>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329267|gb|EFH59686.1| nucleic acid binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 785

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 32/103 (31%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   NMDSGKLKSIISICKSLGDFRLSHQRCSDVLDVFYKFAEWPNMVTILNRLNGSIVEGRRI 182
           N+    +K + ++C   G  +  + R + V+DV +  +EWPNM+ ILN LNG  ++G+++
Sbjct: 670 NLSKSAMKDVRALCVPYGQIKQVYIRGNGVVDVLFDVSEWPNMLNILNSLNGMGIDGKKL 729

Query: 183 LAEPA-PVFPPDVFLALWHHPEGRKHLEATAQVLLHKSSDPSD 308
           +  PA  V PP++   LW  P+ ++++++  Q L+ +   P D
Sbjct: 730 VVRPATTVIPPEILRVLWKDPQEKRYVKSVIQNLVREIEQPLD 772


>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|332643237|gb|AEE76758.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 771

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   NMDSGKLKSIISICKSLGDFRLSHQRCSDVLDVFYKFAEWPNMVTILNRLNGSIVEGRRI 182
           N+    ++ + ++C   G  R  + R + V DVF+  +EWPNM+ ILN +NG  ++G+++
Sbjct: 656 NLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKL 715

Query: 183 LAEPA-PVFPPDVFLALWHHPEGRKHLEATAQVLLHKSSDPSD 308
           +  PA  V PP++   LW  P  ++++++  Q L+ +   P D
Sbjct: 716 VVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLD 758


>gb|ABF59161.1| unknown protein [Arabidopsis thaliana]
          Length = 226

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   NMDSGKLKSIISICKSLGDFRLSHQRCSDVLDVFYKFAEWPNMVTILNRLNGSIVEGRRI 182
           N+    ++ + ++C   G  R  + R + V DVF+  +EWPNM+ ILN +NG  ++G+++
Sbjct: 111 NLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKL 170

Query: 183 LAEPA-PVFPPDVFLALWHHPEGRKHLEATAQVLLHKSSDPSD 308
           +  PA  V PP++   LW  P  ++++++  Q L+ +   P D
Sbjct: 171 VVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLD 213


>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|11994322|dbj|BAB02281.1| unnamed protein product
            [Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
            recognition motif-containing protein [Arabidopsis
            thaliana]
          Length = 811

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3    NMDSGKLKSIISICKSLGDFRLSHQRCSDVLDVFYKFAEWPNMVTILNRLNGSIVEGRRI 182
            N+    ++ + ++C   G  R  + R + V DVF+  +EWPNM+ ILN +NG  ++G+++
Sbjct: 696  NLSKSAMRDVRALCVPYGQIRGVYIRGTGVADVFFDISEWPNMLAILNSMNGMEIDGKKL 755

Query: 183  LAEPA-PVFPPDVFLALWHHPEGRKHLEATAQVLLHKSSDPSD 308
            +  PA  V PP++   LW  P  ++++++  Q L+ +   P D
Sbjct: 756  VVRPATTVIPPEILRVLWKDPREKRYVKSVIQNLVREIEQPLD 798