BLASTX nr result
ID: Scutellaria24_contig00011174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00011174
(1481 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278416.2| PREDICTED: transcription elongation factor S... 116 5e-35
emb|CBI32841.3| unnamed protein product [Vitis vinifera] 116 5e-35
ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis... 105 8e-32
ref|XP_002307949.1| global transcription factor group [Populus t... 99 1e-27
ref|XP_004152869.1| PREDICTED: transcription elongation factor S... 110 1e-27
>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis
vinifera]
Length = 1660
Score = 116 bits (291), Expect(2) = 5e-35
Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Frame = -1
Query: 773 EIVDFIVDEELVDEHGAXXXXXXXXXXXXXXG--VSSSALQEAHEIFGDVEDLLRLRKME 600
E+ DFIV+EE VDEHGA VSSSALQEAHEIFGDV++LL+LRK
Sbjct: 186 EMADFIVEEEEVDEHGAPVRRRKPNKKKSRQAPGVSSSALQEAHEIFGDVDELLQLRKQG 245
Query: 599 VRDRHGESGERSLEDQFDPSILSEKYMTGKDDQIREIDVPERMQISEE 456
+ GE ER LED+F+P ILSEKYMT KDD++REID+PERMQI EE
Sbjct: 246 LDS--GEWRERRLEDEFEPIILSEKYMTEKDDRMREIDIPERMQILEE 291
Score = 59.3 bits (142), Expect(2) = 5e-35
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Frame = -3
Query: 456 STGHPPTDEISIKMETEWIYNQLVSGITPLFNKSGSTTEAGDDEL--KRHIARFLE*MHR 283
STG PPTDEISI+ E WI+NQL +G+ PL G T+EAG D K I RFL+ +H
Sbjct: 292 STGSPPTDEISIEEECNWIFNQLATGMVPLLRSKG-TSEAGHDLSINKDDIMRFLDLVHV 350
Query: 282 SD---GFISMIVYKDC 244
FI+M ++C
Sbjct: 351 QKLDVPFIAMYRKEEC 366
>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
Length = 1646
Score = 116 bits (291), Expect(2) = 5e-35
Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Frame = -1
Query: 773 EIVDFIVDEELVDEHGAXXXXXXXXXXXXXXG--VSSSALQEAHEIFGDVEDLLRLRKME 600
E+ DFIV+EE VDEHGA VSSSALQEAHEIFGDV++LL+LRK
Sbjct: 187 EMADFIVEEEEVDEHGAPVRRRKPNKKKSRQAPGVSSSALQEAHEIFGDVDELLQLRKQG 246
Query: 599 VRDRHGESGERSLEDQFDPSILSEKYMTGKDDQIREIDVPERMQISEE 456
+ GE ER LED+F+P ILSEKYMT KDD++REID+PERMQI EE
Sbjct: 247 LDS--GEWRERRLEDEFEPIILSEKYMTEKDDRMREIDIPERMQILEE 292
Score = 59.3 bits (142), Expect(2) = 5e-35
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Frame = -3
Query: 456 STGHPPTDEISIKMETEWIYNQLVSGITPLFNKSGSTTEAGDDEL--KRHIARFLE*MHR 283
STG PPTDEISI+ E WI+NQL +G+ PL G T+EAG D K I RFL+ +H
Sbjct: 293 STGSPPTDEISIEEECNWIFNQLATGMVPLLRSKG-TSEAGHDLSINKDDIMRFLDLVHV 351
Query: 282 SD---GFISMIVYKDC 244
FI+M ++C
Sbjct: 352 QKLDVPFIAMYRKEEC 367
>ref|XP_002524548.1| suppressor of ty, putative [Ricinus communis]
gi|223536178|gb|EEF37832.1| suppressor of ty, putative
[Ricinus communis]
Length = 1650
Score = 105 bits (263), Expect(2) = 8e-32
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
Frame = -1
Query: 773 EIVDFIVDEELVDEHGAXXXXXXXXXXXXXXG--VSSSALQEAHEIFGDVEDLLRLRKME 600
E+ DFIVDEE VDE+GA V+SS+LQEAHE+FGDV+DLL+ RK E
Sbjct: 185 EMADFIVDEEEVDENGAPIRRKKLKRKKSRQAPGVASSSLQEAHELFGDVDDLLQRRKQE 244
Query: 599 VRDRHGESGERSLEDQFDPSILSEKYMTGKDDQIREIDVPERMQISEE 456
+ E E L+ +F+P+ILSEKYMT KD+QIR D+PERMQI+EE
Sbjct: 245 LESN--EWKETGLDKEFEPTILSEKYMTEKDEQIRVTDIPERMQIAEE 290
Score = 59.3 bits (142), Expect(2) = 8e-32
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = -3
Query: 456 STGHPPTDEISIKMETEWIYNQLVSGITPLFNKSGSTTEAG--DDELKRH-IARFLE*MH 286
STG PPTDE+SI ET WI +Q SG+ P F + G + G D RH I+RFLE H
Sbjct: 291 STGSPPTDEMSITAETNWILHQFASGVVPFFRQKGDQSNEGLQDVPFDRHDISRFLELHH 350
Query: 285 ---RSDGFISMIVYKDC 244
FI+M +DC
Sbjct: 351 GQKLDTPFIAMYRKEDC 367
>ref|XP_002307949.1| global transcription factor group [Populus trichocarpa]
gi|222853925|gb|EEE91472.1| global transcription factor
group [Populus trichocarpa]
Length = 1648
Score = 98.6 bits (244), Expect(2) = 1e-27
Identities = 55/105 (52%), Positives = 70/105 (66%)
Frame = -1
Query: 773 EIVDFIVDEELVDEHGAXXXXXXXXXXXXXXGVSSSALQEAHEIFGDVEDLLRLRKMEVR 594
E+ DFIVDE+ D GVSSSALQEA EIFGDV++L+++R+ +
Sbjct: 183 EMADFIVDEDDDDGTLVRRKKLKKKKSQQASGVSSSALQEAQEIFGDVDELIQIRRQGLE 242
Query: 593 DRHGESGERSLEDQFDPSILSEKYMTGKDDQIREIDVPERMQISE 459
E ER LED+F+P++LSEKYMT KDDQIR D+PERMQ+SE
Sbjct: 243 S--SEWRERRLEDEFEPTVLSEKYMTEKDDQIRMTDIPERMQVSE 285
Score = 52.8 bits (125), Expect(2) = 1e-27
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -3
Query: 459 GSTGHPPTDEISIKMETEWIYNQLVSGITPLFNKSGSTTEAGDDELKRHIARFLE*MHRS 280
GSTG PP D+ SI E+ WIY+Q+ SG PLF +SG D + RFLE H
Sbjct: 286 GSTGPPPLDDFSIMEESNWIYSQIASGTLPLFAESGLLINKDD------VTRFLELHHIQ 339
Query: 279 D---GFISMIVYKDC 244
FI+M ++C
Sbjct: 340 KLDIPFIAMYRKEEC 354
>ref|XP_004152869.1| PREDICTED: transcription elongation factor SPT6-like [Cucumis
sativus]
Length = 1631
Score = 110 bits (275), Expect(2) = 1e-27
Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Frame = -1
Query: 773 EIVDFIVDEELVDEHGAXXXXXXXXXXXXXXG--VSSSALQEAHEIFGDVEDLLRLRKME 600
E+ DFIVDEE DE GA VSS+ALQEAHEIFGDV++LL+LRK E
Sbjct: 176 EMADFIVDEE-EDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRE 234
Query: 599 VRDRHGESGERSLEDQFDPSILSEKYMTGKDDQIREIDVPERMQISEE 456
+ + E E+ LED+F+P ++SEKYMT KDDQIREID+PERMQISEE
Sbjct: 235 LDTQ--EWREKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEE 280
Score = 40.4 bits (93), Expect(2) = 1e-27
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 456 STGHPPTDEISIKMETEWIYNQLVSGITPL-FNKSGSTTEAGDDELKRHI 310
STG PPTD+ S+ E WI+ + +G++ L N SG D++ R++
Sbjct: 281 STGSPPTDDASLDDEASWIHGHIANGVSSLSSNASGQDLSVTKDDILRYL 330