BLASTX nr result

ID: Scutellaria24_contig00011129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011129
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana taba...   165   4e-39
ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding prote...   155   3e-36
emb|CBI24453.3| unnamed protein product [Vitis vinifera]              155   4e-36
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...   147   9e-34
gb|AFK45871.1| unknown [Medicago truncatula]                          145   3e-33

>emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
          Length = 235

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/134 (64%), Positives = 97/134 (72%), Gaps = 4/134 (2%)
 Frame = +2

Query: 35  MADSPRKRYARSPSPWKENXXXXXXXXXXXXXXXXXXXXXXXXXXXXV----EVVNDGTT 202
           MADSPRKRY+RSPSPW++N                                 EV N G T
Sbjct: 8   MADSPRKRYSRSPSPWEKNSRSKSPPESYSRPRGRSRSRSRSRSRSRSRGRGEVSNPGNT 67

Query: 203 LYVTGLSTRVTDRDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVTMETSDDANRCIKHL 382
           LYVTGLSTRVT+RDLE+HFSKEGKVKSVFLVVEPRSR+SRGFAF+TM++ +DANRCIKHL
Sbjct: 68  LYVTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDANRCIKHL 127

Query: 383 NQSVLEGRYITVER 424
           NQSVLEGRYITVE+
Sbjct: 128 NQSVLEGRYITVEK 141


>ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Vitis vinifera]
          Length = 228

 Score =  155 bits (392), Expect = 3e-36
 Identities = 81/134 (60%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
 Frame = +2

Query: 35  MADSPRKRYARSPSPWKENXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VEVVNDGTT 202
           MADSPRKRY++SPSPW+E                                  +  N G T
Sbjct: 1   MADSPRKRYSKSPSPWREQSRSRSRSRSRSRSWSRPRHRSRSRSRSRSRGRTDTSNPGNT 60

Query: 203 LYVTGLSTRVTDRDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVTMETSDDANRCIKHL 382
           LYVTGLSTRVT+R LEDHFS+EGKV S FLV+EPR+R+SRGFAFVTMET +DANRCIKHL
Sbjct: 61  LYVTGLSTRVTERALEDHFSREGKVASCFLVMEPRTRISRGFAFVTMETVEDANRCIKHL 120

Query: 383 NQSVLEGRYITVER 424
           NQSVLEGRYITVE+
Sbjct: 121 NQSVLEGRYITVEK 134


>emb|CBI24453.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  155 bits (391), Expect = 4e-36
 Identities = 81/139 (58%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
 Frame = +2

Query: 20  FKLPIMADSPRKRYARSPSPWKENXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VEVV 187
           F +  +ADSPRKRY++SPSPW+E                                  +  
Sbjct: 28  FIIKCIADSPRKRYSKSPSPWREQSRSRSRSRSRSRSWSRPRHRSRSRSRSRSRGRTDTS 87

Query: 188 NDGTTLYVTGLSTRVTDRDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVTMETSDDANR 367
           N G TLYVTGLSTRVT+R LEDHFS+EGKV S FLV+EPR+R+SRGFAFVTMET +DANR
Sbjct: 88  NPGNTLYVTGLSTRVTERALEDHFSREGKVASCFLVMEPRTRISRGFAFVTMETVEDANR 147

Query: 368 CIKHLNQSVLEGRYITVER 424
           CIKHLNQSVLEGRYITVE+
Sbjct: 148 CIKHLNQSVLEGRYITVEK 166


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score =  147 bits (371), Expect = 9e-34
 Identities = 79/140 (56%), Positives = 88/140 (62%), Gaps = 10/140 (7%)
 Frame = +2

Query: 35  MADSPRKRYARSPSPWK----------ENXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEV 184
           MAD  RKRY+RSPSPWK                                           
Sbjct: 1   MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGREHA 60

Query: 185 VNDGTTLYVTGLSTRVTDRDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVTMETSDDAN 364
            N G TLYVTGLSTRVT+RDLE+HFSKEGKV S FLVVEPR+R+SRGFAFVTM+  DDAN
Sbjct: 61  NNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDAN 120

Query: 365 RCIKHLNQSVLEGRYITVER 424
           RC+KHLNQS+LEGRYITVE+
Sbjct: 121 RCVKHLNQSILEGRYITVEK 140


>gb|AFK45871.1| unknown [Medicago truncatula]
          Length = 270

 Score =  145 bits (367), Expect = 3e-33
 Identities = 81/137 (59%), Positives = 89/137 (64%), Gaps = 7/137 (5%)
 Frame = +2

Query: 35  MADSPRKRYARSPSP--WK-----ENXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVVND 193
           MADSP  R +RSPSP  WK      +                            V   N 
Sbjct: 1   MADSPPPRNSRSPSPSPWKAQSRSRSRSRSVPRQRPRSDSRGRGRSRSRSPVREVNATNP 60

Query: 194 GTTLYVTGLSTRVTDRDLEDHFSKEGKVKSVFLVVEPRSRVSRGFAFVTMETSDDANRCI 373
           G TLYVTGLS+RVTDRDLEDHFSKEGKV S FLVVEPR+R+SRGFAFVTM++ +DA RCI
Sbjct: 61  GNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAERCI 120

Query: 374 KHLNQSVLEGRYITVER 424
           KHLNQSVLEGRYITVER
Sbjct: 121 KHLNQSVLEGRYITVER 137


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