BLASTX nr result

ID: Scutellaria24_contig00011123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011123
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24863.3| unnamed protein product [Vitis vinifera]              195   7e-48
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote...   194   1e-47
ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   193   2e-47
gb|AFK41594.1| unknown [Medicago truncatula]                          193   2e-47

>emb|CBI24863.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  195 bits (495), Expect = 7e-48
 Identities = 97/105 (92%), Positives = 99/105 (94%)
 Frame = +3

Query: 33  CRSKLNMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDP 212
           C   L  SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDP
Sbjct: 3   CYETLFQSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDP 62

Query: 213 EDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 347
           +DP KTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 63  DDPQKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 107


>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Vitis vinifera] gi|359487265|ref|XP_003633552.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Vitis vinifera]
           gi|359487267|ref|XP_003633553.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 3
           [Vitis vinifera] gi|359487269|ref|XP_003633554.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 4 [Vitis vinifera]
          Length = 99

 Score =  194 bits (493), Expect = 1e-47
 Identities = 96/99 (96%), Positives = 98/99 (98%)
 Frame = +3

Query: 51  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT 230
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDP+DP KT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKT 60

Query: 231 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 347
           TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99


>ref|XP_002299952.1| predicted protein [Populus trichocarpa]
           gi|224104033|ref|XP_002313290.1| predicted protein
           [Populus trichocarpa] gi|118483640|gb|ABK93714.1|
           unknown [Populus trichocarpa]
           gi|222847210|gb|EEE84757.1| predicted protein [Populus
           trichocarpa] gi|222849698|gb|EEE87245.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score =  194 bits (492), Expect = 2e-47
 Identities = 97/99 (97%), Positives = 98/99 (98%)
 Frame = +3

Query: 51  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT 230
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD +DPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 60

Query: 231 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 347
           TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  193 bits (491), Expect = 2e-47
 Identities = 95/99 (95%), Positives = 98/99 (98%)
 Frame = +3

Query: 51  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT 230
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDP+DPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 231 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 347
           TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDG+
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS 99


>gb|AFK41594.1| unknown [Medicago truncatula]
          Length = 99

 Score =  193 bits (491), Expect = 2e-47
 Identities = 96/99 (96%), Positives = 98/99 (98%)
 Frame = +3

Query: 51  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPEDPLKT 230
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDP+DPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 231 TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 347
           TDQTR LGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 61  TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99


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