BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011066
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...   423   e-116
ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...   422   e-116
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]   417   e-114
ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycin...   407   e-111
ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH...   405   e-110

>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
            gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
            thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
            [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1| Unknown
            protein [Arabidopsis thaliana] gi|30984534|gb|AAP42730.1|
            At1g53120 [Arabidopsis thaliana]
            gi|332194772|gb|AEE32893.1| RNA-binding S4
            domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  423 bits (1087), Expect = e-116
 Identities = 207/286 (72%), Positives = 250/286 (87%)
 Frame = -2

Query: 1089 TNLSTVSLARFSSSALDVFHSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQE 910
            TNLS  +      SAL   +S +A+KGDVD  LKGVGD+   +EVK+IL+MA+RAS ++E
Sbjct: 35   TNLSIPTSFPLRQSALRRCYSAEAIKGDVDFLLKGVGDQAVAKEVKQILEMARRASSKRE 94

Query: 909  VLHTDFLTPPVVKESMLALAKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALS 730
            VLHTDFLTPP+VKES+  L K AD+K+VAQGGYPEAERCR+S+GHPDVLTSDPDIVAALS
Sbjct: 95   VLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALS 154

Query: 729  ISGNFGFETCTHGDFLGAVLGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVR 550
            I+GNFGF+ C+HGDFLGA+LGTGI R+KLGDI++Q EKGA +L+VPELVDF+V++LDKV 
Sbjct: 155  ITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVG 214

Query: 549  NVSVTCEKIPLLALEYQPPRTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVN 370
            NV VTC KIPLLALEY+PPRTN+ KTVEASLR+D++ASAGFKISRSK+ +LIS+ DVRVN
Sbjct: 215  NVGVTCSKIPLLALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVN 274

Query: 369  WATVTKSNTTLKTGDIVSVSGKGRLKIGEINSTRKGKFGVELIRFL 232
            WATVTK+ T +KTGD+VSVSGKGRLKIGEIN T+KGKF VE+IR+L
Sbjct: 275  WATVTKNGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 320


>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
            gi|302142996|emb|CBI20291.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  422 bits (1085), Expect = e-116
 Identities = 218/321 (67%), Positives = 259/321 (80%), Gaps = 7/321 (2%)
 Frame = -2

Query: 1173 MAATGSAAQAYLRGAXXXXXXXXXXXLKT------NLSTVSLA-RFSSSALDVFHSPQAV 1015
            MAATG    + LR A           +        NL +  L+   +SSA  + H  QA+
Sbjct: 1    MAATGFTTPSVLRKALHSFLPLRLTHINNTLFYYKNLRSFPLSTHLNSSASGMCHLAQAM 60

Query: 1014 KGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLALAKMADI 835
            KGD +  LKGV D+ TIE VK IL+MAKRAS R+EVLHTDFLTPPV+KESM+ L K+AD+
Sbjct: 61   KGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIVLEKLADM 120

Query: 834  KMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAVLGTGIV 655
            K VAQGGYP+AERCRLSVGH +VLT+ PDIVAAL I+GNFGF++C+HGDFLGA+LGTGI 
Sbjct: 121  KAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGAILGTGIA 180

Query: 654  RDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPPRTNTLK 475
            R+KLGDIILQGEKGA +L+VPELVDFLVSSL+KV NVSV+C K+PLLALEY+ PRT T K
Sbjct: 181  REKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEEPRTTTFK 240

Query: 474  TVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSVSGKGRL 295
            T+E SLR+D++ASAGFK+SRSK+ +LISNGDVRVNW TVTK+ TTLKTGD+VSVSGKGRL
Sbjct: 241  TIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRL 300

Query: 294  KIGEINSTRKGKFGVELIRFL 232
            KIGEINST+KGK+ VELIRFL
Sbjct: 301  KIGEINSTKKGKYAVELIRFL 321


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score =  417 bits (1072), Expect = e-114
 Identities = 204/267 (76%), Positives = 239/267 (89%)
 Frame = -2

Query: 1032 HSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLAL 853
            H  QA+KGD +  LKGV D+ TIE VK IL+MAKRAS R+EVLHTDFLTPPV+KESM+ L
Sbjct: 3    HLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIVL 62

Query: 852  AKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAV 673
             K+AD+K VAQGGYP+AERCRLSVGH +VLT+ PDIVAAL I+GNFGF++C+HGDFLGA+
Sbjct: 63   EKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGAI 122

Query: 672  LGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPP 493
            LGTGI R+KLGDIILQGEKGA +L+VPELVDFLVSSL+KV NVSV+C K+PLLALEY+ P
Sbjct: 123  LGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEEP 182

Query: 492  RTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSV 313
            RT T KT+E SLR+D++ASAGFK+SRSK+ +LISNGDVRVNW TVTK+ TTLKTGD+VSV
Sbjct: 183  RTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSV 242

Query: 312  SGKGRLKIGEINSTRKGKFGVELIRFL 232
            SGKGRLKIGEINST+KGK+ VELIRFL
Sbjct: 243  SGKGRLKIGEINSTKKGKYAVELIRFL 269


>ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycine max]
            gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score =  407 bits (1047), Expect = e-111
 Identities = 205/327 (62%), Positives = 260/327 (79%)
 Frame = -2

Query: 1212 SSTERMWALRIPAMAATGSAAQAYLRGAXXXXXXXXXXXLKTNLSTVSLARFSSSALDVF 1033
            SS    W LR         AAQA+               L+ N  +  L+  +S A  V 
Sbjct: 6    SSFGTTWCLR--------RAAQAFAISHSHILRNNVKLSLQRNFCSHLLSVSTSLASGVS 57

Query: 1032 HSPQAVKGDVDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLAL 853
             + QA+KG+VD+ LKGVG++   +EVK IL+MA+RASL++E+LHTDFLTPPV+KESM  L
Sbjct: 58   QTVQALKGEVDLLLKGVGERSVTKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVL 117

Query: 852  AKMADIKMVAQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAV 673
             K+AD+K +AQGGYP+AERCR+SVGHP+ LTSDPDI++ALSI+GNF FE C+HGDFLG++
Sbjct: 118  EKLADVKAIAQGGYPQAERCRISVGHPEELTSDPDIISALSITGNFQFEPCSHGDFLGSI 177

Query: 672  LGTGIVRDKLGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPP 493
            LGTGIVR+KLGDIILQGE+GA I+VVPELV+FL+S+L KVRNV V+C KIPL++L+Y+PP
Sbjct: 178  LGTGIVREKLGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISLDYEPP 237

Query: 492  RTNTLKTVEASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSV 313
            RT + KT+EASLR+D++ASAGFK+SRSK+ ++ISNGDVR+NW  VT   TTLK+GDIVS+
Sbjct: 238  RTKSFKTIEASLRVDALASAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSI 297

Query: 312  SGKGRLKIGEINSTRKGKFGVELIRFL 232
            SGKGRLKIGEINST+KGKF VELIR+L
Sbjct: 298  SGKGRLKIGEINSTKKGKFAVELIRYL 324


>ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH-like [Cucumis sativus]
            gi|449495519|ref|XP_004159865.1| PREDICTED: putative
            RNA-binding protein YlmH-like [Cucumis sativus]
          Length = 319

 Score =  405 bits (1040), Expect = e-110
 Identities = 210/318 (66%), Positives = 252/318 (79%), Gaps = 3/318 (0%)
 Frame = -2

Query: 1176 AMAATGSAAQAYLRGAXXXXXXXXXXXLKTNLSTVSLARFSSSALD---VFHSPQAVKGD 1006
            A  AT  AA   LR A           L  N    + ARF SS L    +    QAVKGD
Sbjct: 2    AATATSIAALWSLRRAAQFSSFRRPLALNLNRLCFNEARFPSSPLGTSGICQLVQAVKGD 61

Query: 1005 VDVFLKGVGDKDTIEEVKRILDMAKRASLRQEVLHTDFLTPPVVKESMLALAKMADIKMV 826
            +DV L GVGDK  I +VK+IL MAKR+  R+EVLHT+FLTPPVVKESMLA+ K+AD+K +
Sbjct: 62   IDVLLNGVGDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAI 121

Query: 825  AQGGYPEAERCRLSVGHPDVLTSDPDIVAALSISGNFGFETCTHGDFLGAVLGTGIVRDK 646
            AQGGYPEAERCR+SVGH D LTSDPDI++ALSI+GNF F  C+HGDFLG++LGTGI R+K
Sbjct: 122  AQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTFHPCSHGDFLGSILGTGIAREK 181

Query: 645  LGDIILQGEKGAHILVVPELVDFLVSSLDKVRNVSVTCEKIPLLALEYQPPRTNTLKTVE 466
            LGDI+LQ E GA +++VPELVDFL+SSL KV NV+V+C +IPL ALEY+PP+T T KT+E
Sbjct: 182  LGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCTRIPLTALEYEPPKTKTFKTIE 241

Query: 465  ASLRLDSIASAGFKISRSKMANLISNGDVRVNWATVTKSNTTLKTGDIVSVSGKGRLKIG 286
            ASLR+D+IASAGFKISRSK+ +LIS+GDVRVNW ++TK+ T LKTGDIVSVSGKGRLKIG
Sbjct: 242  ASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKNGTILKTGDIVSVSGKGRLKIG 301

Query: 285  EINSTRKGKFGVELIRFL 232
            EINST+KGKF VELIR++
Sbjct: 302  EINSTKKGKFAVELIRYV 319