BLASTX nr result

ID: Scutellaria24_contig00011016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00011016
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...   167   1e-39
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...   163   2e-38
ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycin...   159   6e-37
ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...   156   4e-36
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...   155   7e-36

>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score =  167 bits (424), Expect = 1e-39
 Identities = 79/105 (75%), Positives = 93/105 (88%)
 Frame = +1

Query: 112 CRGIASKLFVGGISFYTNEQGLTEAFSQYGEVIEAKIVMDRVSDRSKGFGFVTYASEDEA 291
           CRGIASKLFVGG+SFYT E+GL+E FSQYG+V+EAKIVMDRVSDRSKGFGFVT+ASE+EA
Sbjct: 29  CRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEA 88

Query: 292 EKAIGDMNGKQLNGRVVFVDYAKPRSGSRSSMPIARGPPEPAQDA 426
           +KA  +M+GK+LNGR +FVDYAKPR+     MPIARGPPEP  D+
Sbjct: 89  QKARTEMDGKELNGRTIFVDYAKPRADFGGGMPIARGPPEPTADS 133


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score =  163 bits (413), Expect = 2e-38
 Identities = 76/101 (75%), Positives = 91/101 (90%)
 Frame = +1

Query: 115 RGIASKLFVGGISFYTNEQGLTEAFSQYGEVIEAKIVMDRVSDRSKGFGFVTYASEDEAE 294
           RGIA+KLFVGG+SFYT ++GLTEAFSQYG+V+EA IV DRV DRSKGFGFVT+ASEDEA 
Sbjct: 27  RGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAH 86

Query: 295 KAIGDMNGKQLNGRVVFVDYAKPRSGSRSSMPIARGPPEPA 417
            A+ +MNGK LNGRV++VDYAKPR+ SR+ +PIARGPPEP+
Sbjct: 87  NALSEMNGKTLNGRVIYVDYAKPRTDSRNEVPIARGPPEPS 127


>ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
           gi|255631508|gb|ACU16121.1| unknown [Glycine max]
          Length = 130

 Score =  159 bits (401), Expect = 6e-37
 Identities = 77/100 (77%), Positives = 85/100 (85%)
 Frame = +1

Query: 115 RGIASKLFVGGISFYTNEQGLTEAFSQYGEVIEAKIVMDRVSDRSKGFGFVTYASEDEAE 294
           RGIA KLFVGG+SFYT E  L+EAFS YG+VIEAKIV DRVSDRSKGFGFVT+AS+DEAE
Sbjct: 25  RGIAYKLFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAE 84

Query: 295 KAIGDMNGKQLNGRVVFVDYAKPRSGSRSSMPIARGPPEP 414
            AI DM GK LNGRV+FVDYAKP   +R  +PIARGPPEP
Sbjct: 85  NAIEDMKGKTLNGRVIFVDYAKPNINTRGEIPIARGPPEP 124


>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score =  156 bits (394), Expect = 4e-36
 Identities = 73/103 (70%), Positives = 90/103 (87%)
 Frame = +1

Query: 115 RGIASKLFVGGISFYTNEQGLTEAFSQYGEVIEAKIVMDRVSDRSKGFGFVTYASEDEAE 294
           RGIA+KLFVGG+S+YT ++GL+EAFSQYG+VIEA +VMDRVSD+SKGFGFVT+AS DEA 
Sbjct: 31  RGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAH 90

Query: 295 KAIGDMNGKQLNGRVVFVDYAKPRSGSRSSMPIARGPPEPAQD 423
            A+ +MNGK LNGRV+FV+YAKP + SR ++PIARGPPE   D
Sbjct: 91  TALSEMNGKPLNGRVIFVNYAKPTTSSRGAIPIARGPPEEKTD 133


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  155 bits (392), Expect = 7e-36
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = +1

Query: 115 RGIASKLFVGGISFYTNEQGLTEAFSQYGEVIEAKIVMDRVSDRSKGFGFVTYASEDEAE 294
           RGI +KLFVGG+S YT E GL+EAFSQYG+V+EAKIVMDR  DRSKGFGFVTYASEDEA+
Sbjct: 35  RGITTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQ 94

Query: 295 KAIGDMNGKQLNGRVVFVDYAKPRSGSRSSMPIARGPPEP 414
           KA+ +MNGK LNGRV++VDYAK ++     +PIARGPPEP
Sbjct: 95  KALDEMNGKALNGRVIYVDYAKLKTNFGGGIPIARGPPEP 134


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