BLASTX nr result

ID: Scutellaria24_contig00010933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010933
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...    80   6e-13
ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...    69   1e-09
emb|CBI28266.3| unnamed protein product [Vitis vinifera]               68   2e-09
ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...    68   2e-09
ref|NP_565644.1| Coiled-coil domain-containing protein 55 (DUF20...    68   3e-09

>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
           [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
           PREDICTED: nuclear speckle splicing regulatory protein
           1-like [Cucumis sativus]
          Length = 322

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 41/67 (61%), Positives = 44/67 (65%)
 Frame = +1

Query: 670 MSKYGLQLRVXXXXXXXXXXXXXXXXXAFNDDDDDNVEREIMRQAHKNKTHRDVEEQHKK 849
           MSKYGLQLRV                  F DDDDD+VEREI RQA KNK  +D+EEQHKK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLPAPLGFQDDDDDDVEREISRQASKNKALKDIEEQHKK 60

Query: 850 ALEEDPS 870
           ALEEDPS
Sbjct: 61  ALEEDPS 67


>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536956|gb|EEF38594.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 327

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 35/68 (51%), Positives = 41/68 (60%)
 Frame = +1

Query: 667 EMSKYGLQLRVXXXXXXXXXXXXXXXXXAFNDDDDDNVEREIMRQAHKNKTHRDVEEQHK 846
           +  KYGLQLRV                    D+DDDNVE+EI R A KNK+ +D+EE HK
Sbjct: 12  QQQKYGLQLRVKPQQQAKKPPLPTKPLLFGQDEDDDNVEKEISRHASKNKSLKDIEEMHK 71

Query: 847 KALEEDPS 870
           KALEEDPS
Sbjct: 72  KALEEDPS 79


>emb|CBI28266.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +1

Query: 670 MSKYGLQLRVXXXXXXXXXXXXXXXXX-AFNDDDDDNVEREIMRQAHKNKTHRDVEEQHK 846
           M KYGLQLRV                   F D+++D++EREI RQA KNKT +D+EEQHK
Sbjct: 1   MKKYGLQLRVPPSQQKKQPTRPPLPPPLGFCDENEDDIEREISRQASKNKTLKDIEEQHK 60

Query: 847 KALEEDPS 870
           KALEEDP+
Sbjct: 61  KALEEDPT 68


>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
           vinifera] gi|147866225|emb|CAN79937.1| hypothetical
           protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/68 (52%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +1

Query: 670 MSKYGLQLRVXXXXXXXXXXXXXXXXX-AFNDDDDDNVEREIMRQAHKNKTHRDVEEQHK 846
           M KYGLQLRV                   F D+++D++EREI RQA KNKT +D+EEQHK
Sbjct: 1   MKKYGLQLRVPPSQQKKQPTRPPLPPPLGFCDENEDDIEREISRQASKNKTLKDIEEQHK 60

Query: 847 KALEEDPS 870
           KALEEDP+
Sbjct: 61  KALEEDPT 68


>ref|NP_565644.1| Coiled-coil domain-containing protein 55 (DUF2040) [Arabidopsis
           thaliana] gi|20197674|gb|AAM15195.1| Expressed protein
           [Arabidopsis thaliana] gi|21553752|gb|AAM62845.1|
           unknown [Arabidopsis thaliana]
           gi|26452543|dbj|BAC43356.1| unknown protein [Arabidopsis
           thaliana] gi|28973091|gb|AAO63870.1| unknown protein
           [Arabidopsis thaliana] gi|51968604|dbj|BAD42994.1|
           unknown protein [Arabidopsis thaliana]
           gi|51968616|dbj|BAD43000.1| unknown protein [Arabidopsis
           thaliana] gi|330252874|gb|AEC07968.1| Coiled-coil
           domain-containing protein 55 (DUF2040) [Arabidopsis
           thaliana]
          Length = 323

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/67 (47%), Positives = 42/67 (62%)
 Frame = +1

Query: 670 MSKYGLQLRVXXXXXXXXXXXXXXXXXAFNDDDDDNVEREIMRQAHKNKTHRDVEEQHKK 849
           M KYGLQ+R                   F++++D +VE+EI RQA K K H+++EEQHKK
Sbjct: 1   MKKYGLQIRAPSQKKQSSSRPPLRPASIFDEEEDHDVEKEISRQATKTKAHKEIEEQHKK 60

Query: 850 ALEEDPS 870
           ALEEDPS
Sbjct: 61  ALEEDPS 67


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