BLASTX nr result

ID: Scutellaria24_contig00010847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010847
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513029.1| protein with unknown function [Ricinus commu...    82   1e-13
ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c...    65   2e-08
gb|AFK34874.1| unknown [Lotus japonicus]                               64   3e-08
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]    64   3e-08

>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
 Frame = +2

Query: 200 VKGQKKGKRKSNESLKVVYISSPMKVKTSATRFRSLVQQLTGKNSDIAQYMDDNNNSHDE 379
           +K +K+  ++S + +KVVYISSPMKV+TSA++FR+LVQ+LTGK+SD A++MD NN +  E
Sbjct: 8   MKSRKQASKRSKKGIKVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGA--E 65

Query: 380 VYEIDCEEQQGKETSDPY-----QMCCNYSSLSRDGTPSSSDSFPEAMNDVTASRIMKEE 544
            Y  +    + +  SD +      +  +Y+  S   +P S  S  +  +       M+  
Sbjct: 66  NYSTETTPDRSRAASDEHGSVLLPLMSSYNEPSFSSSPDSDSSIFDPFDRFLPP--MEGS 123

Query: 545 FEGIFSSNSFYVPSDLDV 598
           F  +F SN  +    LDV
Sbjct: 124 FMSMFQSNFPHESFQLDV 141


>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 52/142 (36%), Positives = 75/142 (52%)
 Frame = +2

Query: 176 MDQRVPRMVKGQKKGKRKSNESLKVVYISSPMKVKTSATRFRSLVQQLTGKNSDIAQYMD 355
           MD     M  G++   ++  +++KVVYISSPMKVKTSA++FR+LVQ+LTGK+SD  ++MD
Sbjct: 1   MDVLGANMKSGKRSHTKRGKKAIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMD 60

Query: 356 DNNNSHDEVYEIDCEEQQGKETSDPYQMCCNYSSLSRDGTPSSSDSFPEAMNDVTASRIM 535
            N             E     +  P    CN  S S     +SS+SF  ++ D      M
Sbjct: 61  INGARDSLEIPHQTAEYDHHPSVFPLTNSCNDQSPS----TTSSESFLGSL-DGEFFPSM 115

Query: 536 KEEFEGIFSSNSFYVPSDLDVL 601
           +  F G+   + F+    LDVL
Sbjct: 116 EGSFMGMLQPSLFHESFQLDVL 137


>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Cucumis sativus] gi|449487122|ref|XP_004157503.1|
           PREDICTED: sigma factor binding protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 140

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = +2

Query: 203 KGQKKGKRKSNESLKVVYISSPMKVKTSATRFRSLVQQLTGKNSDIAQYMDDNNNSHD 376
           K  K+ K+ +    KVVYISSPMKVKTSA++FRSLVQ+LTG++SD  ++M+  +   D
Sbjct: 7   KQAKRSKKSAGAGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFMEMASGGSD 64


>gb|AFK34874.1| unknown [Lotus japonicus]
          Length = 120

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/59 (50%), Positives = 48/59 (81%)
 Frame = +2

Query: 197 MVKGQKKGKRKSNESLKVVYISSPMKVKTSATRFRSLVQQLTGKNSDIAQYMDDNNNSH 373
           ++KG+++GK+   E +KV YISSPMKVKTSA+ FR+LVQ+LTG++S++A+   + N ++
Sbjct: 9   VMKGKRQGKKNKKE-IKVTYISSPMKVKTSASNFRALVQELTGQDSNVAETFVEANGAY 66


>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
          Length = 124

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/49 (59%), Positives = 42/49 (85%)
 Frame = +2

Query: 212 KKGKRKSNESLKVVYISSPMKVKTSATRFRSLVQQLTGKNSDIAQYMDD 358
           KK  +    ++KVVYISSPMKVKTSA++FR+LVQ+LTG++SD+ +YM++
Sbjct: 2   KKQGKSRRAAVKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYMEN 50


Top