BLASTX nr result

ID: Scutellaria24_contig00010714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010714
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   211   5e-53
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   208   6e-52
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   203   2e-50
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      200   1e-49
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   198   6e-49

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  211 bits (538), Expect = 5e-53
 Identities = 97/128 (75%), Positives = 115/128 (89%)
 Frame = +3

Query: 3   NKKVTKSGNSRWQCDRCNQEFEECDYRYLLQVQVQDHTGMTWMTAFQEAGEEILGCSAKE 182
           NKKVT+SGN+RWQCDRCNQEFE+CDYRYLLQ QVQDHTG+TW+TAFQEAGEEILGCSAKE
Sbjct: 493 NKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQVQDHTGLTWVTAFQEAGEEILGCSAKE 552

Query: 183 LYVSKYEAQDDLRFVEVLRNCLFTEFLLKLKIKEEIYGDEQKLKITVVKAEKLNYAEESR 362
           LY+ KYE +DD RF E++R+ L  +FL +LKIKEE+YG+EQ++KITVVKA+K+NY  ESR
Sbjct: 553 LYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQRVKITVVKADKVNYTSESR 612

Query: 363 FLLDGISK 386
            LLD ISK
Sbjct: 613 HLLDLISK 620


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  208 bits (529), Expect = 6e-52
 Identities = 97/132 (73%), Positives = 115/132 (87%)
 Frame = +3

Query: 3   NKKVTKSGNSRWQCDRCNQEFEECDYRYLLQVQVQDHTGMTWMTAFQEAGEEILGCSAKE 182
           NKKVT SGNSRWQCDRCNQEF+ECDYRYLLQVQ+QDHTG+TW+TAFQE+GEEILG  AKE
Sbjct: 539 NKKVTSSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTWVTAFQESGEEILGLPAKE 598

Query: 183 LYVSKYEAQDDLRFVEVLRNCLFTEFLLKLKIKEEIYGDEQKLKITVVKAEKLNYAEESR 362
           LY  KYE QDD +F +V+R+ LF +FL +LKIKEE+YGDEQ++KITVVKAEK+NY+ E R
Sbjct: 599 LYQLKYEMQDDTKFSDVIRSRLFQQFLFRLKIKEEMYGDEQRVKITVVKAEKVNYSSEGR 658

Query: 363 FLLDGISKFRLY 398
           +LLD IS+   Y
Sbjct: 659 YLLDLISQCPRY 670


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  203 bits (516), Expect = 2e-50
 Identities = 89/129 (68%), Positives = 115/129 (89%)
 Frame = +3

Query: 3   NKKVTKSGNSRWQCDRCNQEFEECDYRYLLQVQVQDHTGMTWMTAFQEAGEEILGCSAKE 182
           NKKVT+SGNS+W CDRCNQEFE+CDYRYLLQ Q+QDHTG+TW+TAFQE GEEILG S KE
Sbjct: 493 NKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSGKE 552

Query: 183 LYVSKYEAQDDLRFVEVLRNCLFTEFLLKLKIKEEIYGDEQKLKITVVKAEKLNYAEESR 362
           LY+ KYE QDD++F E++R+ +F +FL +LKIKEE+YGDEQ++K TVVKA+++NY+ ES+
Sbjct: 553 LYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESK 612

Query: 363 FLLDGISKF 389
           ++LD +SKF
Sbjct: 613 YMLDLLSKF 621


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  200 bits (509), Expect = 1e-49
 Identities = 90/129 (69%), Positives = 113/129 (87%)
 Frame = +3

Query: 3   NKKVTKSGNSRWQCDRCNQEFEECDYRYLLQVQVQDHTGMTWMTAFQEAGEEILGCSAKE 182
           NKKVT+SG++RWQCDRCNQEFEECDYRYLLQ Q+QDHTG+TW+TAFQE GEEI+G  AKE
Sbjct: 506 NKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQEGGEEIMGYPAKE 565

Query: 183 LYVSKYEAQDDLRFVEVLRNCLFTEFLLKLKIKEEIYGDEQKLKITVVKAEKLNYAEESR 362
           LY  KYE +DD RF +++++ LF  F+ +LKIKEE+YG+EQK+K TVVKA+K+NY+ ESR
Sbjct: 566 LYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQKVKSTVVKADKVNYSAESR 625

Query: 363 FLLDGISKF 389
           ++LD ISKF
Sbjct: 626 YMLDLISKF 634


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  198 bits (503), Expect = 6e-49
 Identities = 89/129 (68%), Positives = 114/129 (88%), Gaps = 3/129 (2%)
 Frame = +3

Query: 3   NKKVTKSGNSRWQCDRCNQEFEECDYRYLLQVQVQDHTGMTWMTAFQEAGEEILGCSAKE 182
           NKKVT+SGNS+W CDRCNQEFE+CDYRYLLQ Q+QDHTG+TW+TAFQE GEEILG SAKE
Sbjct: 493 NKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSAKE 552

Query: 183 LYVSKYEAQDDLRFVEVLRNCLFTEFLLKLKIKEEIYGDEQKLKITVVKAEKLNYAEESR 362
           LY+ KYE QDD++F E++R+ +F +FL +LKIKEE+YGDEQ++K TVVKA+++NY+ ES+
Sbjct: 553 LYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSESK 612

Query: 363 FL---LDGI 380
           ++   LDGI
Sbjct: 613 YISGPLDGI 621


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