BLASTX nr result

ID: Scutellaria24_contig00010684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010684
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   112   1e-22
ref|XP_002302948.1| high mobility group family [Populus trichoca...   110   5e-22
dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]...   104   2e-20
ref|XP_002305213.1| high mobility group family [Populus trichoca...   102   1e-19
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   101   2e-19

>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  112 bits (280), Expect = 1e-22
 Identities = 50/78 (64%), Positives = 65/78 (83%)
 Frame = +3

Query: 60  MATEELKRSSSLPPYPQMINEAIDELKQAEGANKLAISKYMESKYGEMPAGHADLLSHHL 239
           MATEE+ +  SLPPYP+M+ +A+D L +  G+NK AISKY+ES YGE+P GHA LL+HHL
Sbjct: 1   MATEEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHL 60

Query: 240 DMMKDSGELLFIKNNYVK 293
           + MKDSGEL+F+KNNY+K
Sbjct: 61  NKMKDSGELVFLKNNYMK 78


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score =  110 bits (274), Expect = 5e-22
 Identities = 50/78 (64%), Positives = 63/78 (80%)
 Frame = +3

Query: 60  MATEELKRSSSLPPYPQMINEAIDELKQAEGANKLAISKYMESKYGEMPAGHADLLSHHL 239
           MA EE+ +  SLPPYP+MI  AI+ L +A G NK +ISKY+ESKYG++PAGH  LLSHHL
Sbjct: 1   MAAEEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHL 60

Query: 240 DMMKDSGELLFIKNNYVK 293
           + MKD+GEL+F KNNY+K
Sbjct: 61  NRMKDTGELVFWKNNYMK 78


>dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
           gi|1483175|dbj|BAA13134.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  104 bits (260), Expect = 2e-20
 Identities = 47/78 (60%), Positives = 63/78 (80%)
 Frame = +3

Query: 60  MATEELKRSSSLPPYPQMINEAIDELKQAEGANKLAISKYMESKYGEMPAGHADLLSHHL 239
           MATEE+ +  SLPPY +MI +A+D L +  G+NK AISKY+ES  GE+P GH+ LL+HHL
Sbjct: 1   MATEEVNKPPSLPPYTEMITKALDSLNEPNGSNKSAISKYIESTCGELPDGHSTLLAHHL 60

Query: 240 DMMKDSGELLFIKNNYVK 293
           + MK+SGEL+F+KNNY+K
Sbjct: 61  NKMKESGELVFLKNNYMK 78


>ref|XP_002305213.1| high mobility group family [Populus trichocarpa]
           gi|222848177|gb|EEE85724.1| high mobility group family
           [Populus trichocarpa]
          Length = 189

 Score =  102 bits (254), Expect = 1e-19
 Identities = 46/78 (58%), Positives = 61/78 (78%)
 Frame = +3

Query: 60  MATEELKRSSSLPPYPQMINEAIDELKQAEGANKLAISKYMESKYGEMPAGHADLLSHHL 239
           MA EE+ +  SLPPYP+MI  AI  L +  G+NK +ISKY+ESK+G +PAGH  LL+HHL
Sbjct: 1   MAAEEISKPPSLPPYPEMIWSAIAALNETGGSNKTSISKYIESKHGNLPAGHTALLAHHL 60

Query: 240 DMMKDSGELLFIKNNYVK 293
           + M D+GEL+F+KNNY+K
Sbjct: 61  NRMTDTGELMFLKNNYMK 78


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score =  101 bits (252), Expect = 2e-19
 Identities = 46/78 (58%), Positives = 60/78 (76%)
 Frame = +3

Query: 60  MATEELKRSSSLPPYPQMINEAIDELKQAEGANKLAISKYMESKYGEMPAGHADLLSHHL 239
           MAT+E+ +  SLPPYP+MI  AI+ L    G+NK  ISKY+ES YG +P GH+ LL+HHL
Sbjct: 1   MATQEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHL 60

Query: 240 DMMKDSGELLFIKNNYVK 293
           +MMK SG+L+F KNNY+K
Sbjct: 61  NMMKASGDLVFWKNNYMK 78


Top