BLASTX nr result

ID: Scutellaria24_contig00010678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010678
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu...   345   1e-92
emb|CBI36942.3| unnamed protein product [Vitis vinifera]              343   6e-92
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-...   343   6e-92
gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]        338   1e-90
ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-...   336   7e-90

>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
            gi|223545774|gb|EEF47278.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1306

 Score =  345 bits (885), Expect = 1e-92
 Identities = 186/255 (72%), Positives = 204/255 (80%), Gaps = 2/255 (0%)
 Frame = -1

Query: 1083 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAESFMLSPIDRIFVRMGAKDQIMAGQSTFL 904
            LTGPNMGGKSTLLRQVCLAVILAQ+GADVPAESF LSP+DRIFVRMGAKD IMAGQSTFL
Sbjct: 1052 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFL 1111

Query: 903  TELLETASMLASATRNSLVALDELGRGTSTSDGQAIAASVLEHFVCTVQCRGMFSTHYHR 724
            TEL ETA ML+SATRNSLV LDELGRGTSTSDGQAIA SVLEHFV  VQCRGMFSTHYHR
Sbjct: 1112 TELSETALMLSSATRNSLVTLDELGRGTSTSDGQAIAESVLEHFVHRVQCRGMFSTHYHR 1171

Query: 723  LAVDYQNYPKVSLCHMACQVVKGVTGLEEVVFLYKLMPGACPKSYGVNVARLAGLPDSVL 544
            L+VDYQ  PKVSLCHMACQV +GV  +EEV FLY+L PGACPKSYGVNVARLAGLPD +L
Sbjct: 1172 LSVDYQKDPKVSLCHMACQVGRGVGEVEEVTFLYRLTPGACPKSYGVNVARLAGLPDPIL 1231

Query: 543  QKAAAMSEEFEANYGK--RLGANNLPSQSWEDKASLIIENLIKIEATSNCHTPPLSEVVD 370
            QKAAA S EFE  YGK  R    NL  QS  D+  + ++++  + AT+       S  + 
Sbjct: 1232 QKAAAKSREFEVIYGKHRRRSEGNLTIQSNGDEMGVFLQHVFDV-ATNLTGNRSESIGIS 1290

Query: 369  LLTSLQLRARSLLEQ 325
             LT LQ RAR  L+Q
Sbjct: 1291 SLTELQHRARVFLQQ 1305


>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score =  343 bits (879), Expect = 6e-92
 Identities = 188/260 (72%), Positives = 206/260 (79%), Gaps = 6/260 (2%)
 Frame = -1

Query: 1083 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAESFMLSPIDRIFVRMGAKDQIMAGQSTFL 904
            LTGPNMGGKSTLLRQVCLAVILAQ+GADVPAESF LSP+DRIFVRMGAKD IMAGQSTFL
Sbjct: 978  LTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGAKDNIMAGQSTFL 1037

Query: 903  TELLETASMLASATRNSLVALDELGRGTSTSDGQAIAASVLEHFVCTVQCRGMFSTHYHR 724
            TEL ETASML SAT NSLVALDELGRGTSTSDGQAIA SVLEHFV  V+CRGMFSTHYHR
Sbjct: 1038 TELSETASMLTSATCNSLVALDELGRGTSTSDGQAIAESVLEHFVHKVRCRGMFSTHYHR 1097

Query: 723  LAVDYQNYPKVSLCHMACQVVKGVTGLEEVVFLYKLMPGACPKSYGVNVARLAGLPDSVL 544
            LAVDY+   KVSLCHMACQV KGV G+EEV FLY+L PGACPKSYGVNVARLAGLP+SVL
Sbjct: 1098 LAVDYKKNSKVSLCHMACQVGKGVGGVEEVTFLYRLRPGACPKSYGVNVARLAGLPNSVL 1157

Query: 543  QKAAAMSEEFEANYGK-RLGANN-----LPSQSWEDKASLIIENLIKIEATSNCHTPPLS 382
            QKAAA S E E  YG+ R G+++     L SQ+ ED     I++LI   A  + H     
Sbjct: 1158 QKAAAKSREIEGIYGRHRKGSDDGCDERLSSQNSEDDVVFFIQSLINGVAKLSYHKSFKD 1217

Query: 381  EVVDLLTSLQLRARSLLEQH 322
                 L+ LQ RAR  L+Q+
Sbjct: 1218 IHASSLSDLQQRARIFLDQN 1237


>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
          Length = 1297

 Score =  343 bits (879), Expect = 6e-92
 Identities = 188/260 (72%), Positives = 206/260 (79%), Gaps = 6/260 (2%)
 Frame = -1

Query: 1083 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAESFMLSPIDRIFVRMGAKDQIMAGQSTFL 904
            LTGPNMGGKSTLLRQVCLAVILAQ+GADVPAESF LSP+DRIFVRMGAKD IMAGQSTFL
Sbjct: 1038 LTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGAKDNIMAGQSTFL 1097

Query: 903  TELLETASMLASATRNSLVALDELGRGTSTSDGQAIAASVLEHFVCTVQCRGMFSTHYHR 724
            TEL ETASML SAT NSLVALDELGRGTSTSDGQAIA SVLEHFV  V+CRGMFSTHYHR
Sbjct: 1098 TELSETASMLTSATCNSLVALDELGRGTSTSDGQAIAESVLEHFVHKVRCRGMFSTHYHR 1157

Query: 723  LAVDYQNYPKVSLCHMACQVVKGVTGLEEVVFLYKLMPGACPKSYGVNVARLAGLPDSVL 544
            LAVDY+   KVSLCHMACQV KGV G+EEV FLY+L PGACPKSYGVNVARLAGLP+SVL
Sbjct: 1158 LAVDYKKNSKVSLCHMACQVGKGVGGVEEVTFLYRLRPGACPKSYGVNVARLAGLPNSVL 1217

Query: 543  QKAAAMSEEFEANYGK-RLGANN-----LPSQSWEDKASLIIENLIKIEATSNCHTPPLS 382
            QKAAA S E E  YG+ R G+++     L SQ+ ED     I++LI   A  + H     
Sbjct: 1218 QKAAAKSREIEGIYGRHRKGSDDGCDERLSSQNSEDDVVFFIQSLINGVAKLSYHKSFKD 1277

Query: 381  EVVDLLTSLQLRARSLLEQH 322
                 L+ LQ RAR  L+Q+
Sbjct: 1278 IHASSLSDLQQRARIFLDQN 1297


>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 1303

 Score =  338 bits (867), Expect = 1e-90
 Identities = 182/254 (71%), Positives = 201/254 (79%)
 Frame = -1

Query: 1083 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAESFMLSPIDRIFVRMGAKDQIMAGQSTFL 904
            LTGPNMGGKSTLLRQVCLAVILAQ+GADVPA SF LSP+DRIFVRMGAKD IMAGQSTFL
Sbjct: 1052 LTGPNMGGKSTLLRQVCLAVILAQVGADVPASSFDLSPVDRIFVRMGAKDHIMAGQSTFL 1111

Query: 903  TELLETASMLASATRNSLVALDELGRGTSTSDGQAIAASVLEHFVCTVQCRGMFSTHYHR 724
            TE+LETASML+ A+RNSLVALDELGRGTSTSDGQAIA SVLEHFV  VQCRGMFSTHYHR
Sbjct: 1112 TEILETASMLSLASRNSLVALDELGRGTSTSDGQAIAESVLEHFVHNVQCRGMFSTHYHR 1171

Query: 723  LAVDYQNYPKVSLCHMACQVVKGVTGLEEVVFLYKLMPGACPKSYGVNVARLAGLPDSVL 544
            L++DYQ   +VSLCHM CQV KG   LEEV FLY+L PGACPKSYGVNVARLAGLPD VL
Sbjct: 1172 LSIDYQKDSRVSLCHMGCQVGKGSGDLEEVTFLYRLTPGACPKSYGVNVARLAGLPDDVL 1231

Query: 543  QKAAAMSEEFEANYGKRLGANNLPSQSWEDKASLIIENLIKIEATSNCHTPPLSEVVDLL 364
            QKAAA SEEFE     +    NL     + +A+L ++NLI +   + C       V+  L
Sbjct: 1232 QKAAAKSEEFEMYGHIKQSKENLSGNLMKKEAAL-VQNLINLVLENKCDNNE-GVVLGEL 1289

Query: 363  TSLQLRARSLLEQH 322
              LQ RAR LLEQ+
Sbjct: 1290 NGLQNRARILLEQN 1303


>ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
          Length = 1269

 Score =  336 bits (861), Expect = 7e-90
 Identities = 180/255 (70%), Positives = 203/255 (79%), Gaps = 3/255 (1%)
 Frame = -1

Query: 1083 LTGPNMGGKSTLLRQVCLAVILAQIGADVPAESFMLSPIDRIFVRMGAKDQIMAGQSTFL 904
            LTGPNMGGKSTLLRQVCL VILAQ+GADVPAESF LSP+DRIFVRMGAKD IMAGQSTFL
Sbjct: 1020 LTGPNMGGKSTLLRQVCLTVILAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFL 1079

Query: 903  TELLETASMLASATRNSLVALDELGRGTSTSDGQAIAASVLEHFVCTVQCRGMFSTHYHR 724
            TEL ETASML+SAT NSLVALDELGRGT+TSDGQAIA SVLEH V  VQCRG+FSTHYHR
Sbjct: 1080 TELSETASMLSSATCNSLVALDELGRGTATSDGQAIAESVLEHLVRKVQCRGLFSTHYHR 1139

Query: 723  LAVDYQNYPKVSLCHMACQVVKGVTGLEEVVFLYKLMPGACPKSYGVNVARLAGLPDSVL 544
            LAVDY   PKV LCHMACQV  G+ GL+EV FLY+L PGACPKSYGVNVAR+AGLP SVL
Sbjct: 1140 LAVDYLKDPKVCLCHMACQVGSGIAGLDEVTFLYRLTPGACPKSYGVNVARIAGLPTSVL 1199

Query: 543  QKAAAMSEEFEANYGKRLGAN---NLPSQSWEDKASLIIENLIKIEATSNCHTPPLSEVV 373
            QKAAA S EFEA YGK    +   N P+++W D+ + II+ ++   AT        +  V
Sbjct: 1200 QKAAAKSREFEATYGKCRKVSTVTNSPNKNWVDEIAAIIQ-ILNNAATQE------TICV 1252

Query: 372  DLLTSLQLRARSLLE 328
              L+ LQ +AR L++
Sbjct: 1253 GSLSELQDKARELMQ 1267


Top