BLASTX nr result

ID: Scutellaria24_contig00010506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010506
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA44955.1| TPA: hypothetical protein ZEAMMB73_907385 [Zea m...    72   6e-23
ref|NP_001169423.1| hypothetical protein [Zea mays] gi|224029271...    70   1e-22
ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...   110   2e-22
gb|AAC12825.1| putative UDP-galactose-4-epimerase [Arabidopsis t...   108   6e-22
ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...   107   8e-22

>tpg|DAA44955.1| TPA: hypothetical protein ZEAMMB73_907385 [Zea mays]
          Length = 265

 Score = 71.6 bits (174), Expect(2) = 6e-23
 Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 13/72 (18%)
 Frame = +3

Query: 213 VVISDNNGKNGVNTLIYSSTCATYGELDRMPITETTPQ-----------VAEDIIIDF-- 353
           ++I +    +GV TLIYSSTCATYGE D+MPITE TPQ           +AEDIIIDF  
Sbjct: 28  LLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATPQFPINPYGKAKKMAEDIIIDFSN 87

Query: 354 SKTSNMAIMILR 389
           SK ++MA+MILR
Sbjct: 88  SKGADMAVMILR 99



 Score = 60.8 bits (146), Expect(2) = 6e-23
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +1

Query: 133 MHFAAVAYVGESTAQPLRYYQNITSNTLLLVTTMA 237
           MHFAAVAYVGEST +PLRYY NITSNTLL++  MA
Sbjct: 1   MHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMA 35


>ref|NP_001169423.1| hypothetical protein [Zea mays] gi|224029271|gb|ACN33711.1| unknown
           [Zea mays] gi|413955990|gb|AFW88639.1| hypothetical
           protein ZEAMMB73_974281 [Zea mays]
          Length = 267

 Score = 70.5 bits (171), Expect(2) = 1e-22
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 13/72 (18%)
 Frame = +3

Query: 213 VVISDNNGKNGVNTLIYSSTCATYGELDRMPITETTPQ-----------VAEDIIIDFSK 359
           ++I +    +GV TLIYSSTCATYGE ++MPITE TPQ           +AEDII+DFSK
Sbjct: 28  LLILEAMASHGVKTLIYSSTCATYGEPEKMPITEATPQFPINPYGKAKKMAEDIILDFSK 87

Query: 360 T--SNMAIMILR 389
           +  ++MA+MILR
Sbjct: 88  SKGADMAVMILR 99



 Score = 60.8 bits (146), Expect(2) = 1e-22
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +1

Query: 133 MHFAAVAYVGESTAQPLRYYQNITSNTLLLVTTMA 237
           MHFAAVAYVGEST +PLRYY NITSNTLL++  MA
Sbjct: 1   MHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMA 35


>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
           lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
           ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 15/144 (10%)
 Frame = +3

Query: 3   NMEAVQILQKLYPQPGRLHCIYADLGDTSAVSFLIHLLSFRXXXXXXXXXXXW*KHGPTS 182
           N+ AV+ILQ+L+P+PGRL  IYADLGD  AV+ +    +F                G ++
Sbjct: 107 NLGAVKILQELFPEPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYV----GEST 162

Query: 183 TVLSEYYIKY----VVISDNNGKNGVNTLIYSSTCATYGELDRMPITETTPQV------- 329
               +YY       +V+ +    +GV TLIYSSTCATYGE D MPITE TPQV       
Sbjct: 163 QFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCATYGEPDTMPITEETPQVPINPYGK 222

Query: 330 ----AEDIIIDFSKTSNMAIMILR 389
               AEDII+DFSK SNMA+MILR
Sbjct: 223 AKKMAEDIILDFSKNSNMAVMILR 246


>gb|AAC12825.1| putative UDP-galactose-4-epimerase [Arabidopsis thaliana]
          Length = 375

 Score =  108 bits (269), Expect = 6e-22
 Identities = 66/140 (47%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
 Frame = +3

Query: 3   NMEAVQILQKLYPQPGRLHCIYADLGDTSAVSFLIHLLSFRXXXXXXXXXXXW*KHGPTS 182
           N+ AV+ILQ+L+P+PG+L  IYADLGD +AV+ +    +F            +  H  TS
Sbjct: 74  NLGAVKILQQLFPEPGKLQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYYY--HNITS 131

Query: 183 TVLSEYYIKYVVISDNNGKNGVNTLIYSSTCATYGELDRMPITETTPQV----------- 329
             L        V+ +    +GV TLIYSSTCATYGE ++MPITE TPQV           
Sbjct: 132 NTL--------VVLETMAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKM 183

Query: 330 AEDIIIDFSKTSNMAIMILR 389
           AEDII+DFSK S MA+MILR
Sbjct: 184 AEDIILDFSKNSIMAVMILR 203


>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|79318985|ref|NP_001031118.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
           Full=UDP-arabinose 4-epimerase 1; AltName:
           Full=UDP-D-xylose 4-epimerase 1
           gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
           F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
           from Arabidopsis thaliana BAC gb|AC004238 and is a
           member of PF|01370 the NAD dependent
           epimerase/dehydratase family. EST gb|AA597338 comes from
           this gene [Arabidopsis thaliana]
           gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein
           [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
           At1g30620/T5I8_7 [Arabidopsis thaliana]
           gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
           thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
           4-epimerase [Arabidopsis thaliana]
           gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
           thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 419

 Score =  107 bits (268), Expect = 8e-22
 Identities = 67/144 (46%), Positives = 85/144 (59%), Gaps = 15/144 (10%)
 Frame = +3

Query: 3   NMEAVQILQKLYPQPGRLHCIYADLGDTSAVSFLIHLLSFRXXXXXXXXXXXW*KHGPTS 182
           N+ AV+ILQ+L+P+PGRL  IYADLGD  AV+ +    +F                G ++
Sbjct: 107 NLAAVRILQELFPEPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYV----GEST 162

Query: 183 TVLSEYYIKY----VVISDNNGKNGVNTLIYSSTCATYGELDRMPITETTPQV------- 329
               +YY       +V+ +    +GV TLIYSSTCATYGE D MPITE TPQV       
Sbjct: 163 QFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGK 222

Query: 330 ----AEDIIIDFSKTSNMAIMILR 389
               AEDII+DFSK S+MA+MILR
Sbjct: 223 AKKMAEDIILDFSKNSDMAVMILR 246


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