BLASTX nr result

ID: Scutellaria24_contig00010400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010400
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ55680.1| geranyl diphosphate synthase small subunit type I...   174   7e-42
gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum ...   129   3e-28
emb|CBI37811.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synt...   115   3e-24
ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synt...   114   8e-24

>gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
           miltiorrhiza]
          Length = 331

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/93 (89%), Positives = 87/93 (93%)
 Frame = -1

Query: 279 MAFSSIITSAPHVCLPKFTRPTLRRTIRCSIASISPKFDLKTYWTALIEEIDQKLDEAIP 100
           M FSS+ITS PHVCLPK TRP LRRTIRCS AS+SP FDLKTYWT+LI+EIDQKLDEAIP
Sbjct: 1   MLFSSVITSTPHVCLPKVTRPALRRTIRCSAASVSPGFDLKTYWTSLIKEIDQKLDEAIP 60

Query: 99  VKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE 1
           VKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE
Sbjct: 61  VKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE 93


>gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
          Length = 334

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 4/97 (4%)
 Frame = -1

Query: 279 MAFSSIITSAPHVCLPKFTRPTLRRTIRCS----IASISPKFDLKTYWTALIEEIDQKLD 112
           M FS +++ +P +CLP+ +R  +++ I+CS     AS S KFDLKTYWT LI +I+QKLD
Sbjct: 1   MVFSMVMSFSPSLCLPR-SRMVMQKAIQCSSSVSTASESVKFDLKTYWTTLIVDINQKLD 59

Query: 111 EAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE 1
           EA+PVKYP QIYEAMRYSVLAKGAKR+PP+MCVAACE
Sbjct: 60  EAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACE 96


>emb|CBI37811.3| unnamed protein product [Vitis vinifera]
          Length = 1187

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/118 (55%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
 Frame = -1

Query: 336 KNSERITGKIERKSLKITVMAFSSIITSAPHVCLPKFTRPTLRRTIRCSIASISP----- 172
           +N+  I  + E +S      A S    +  H  LP  +   L RTIRC+  SIS      
Sbjct: 243 ENNGEIVEEREGRSAMAFTTALSLPSAARLHHRLPNRSSLNLPRTIRCTSPSISVSPSKS 302

Query: 171 -KFDLKTYWTALIEEIDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE 1
            +FDL++YWT LI EI+ KL+EAIPVKYPQQIYEAMRYSVLAKG KRAPPVMCVA CE
Sbjct: 303 MQFDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCE 360


>ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
           chloroplastic-like isoform 2 [Vitis vinifera]
          Length = 341

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/103 (61%), Positives = 75/103 (72%), Gaps = 10/103 (9%)
 Frame = -1

Query: 279 MAFSSIIT----SAPHVCLPKFTRPTLRRTIRCSIASISP------KFDLKTYWTALIEE 130
           MAF++ ++    +  H  LP  +  +L RTIRCS  SIS       +FDL++YWT LI E
Sbjct: 1   MAFTTALSLPSAARLHHRLPNRSSLSLPRTIRCSSPSISVSPSKSMQFDLRSYWTTLISE 60

Query: 129 IDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE 1
           I+ KL+EAIPVKYPQQIYEAMRYSVLAKG KRAPPVMCVA CE
Sbjct: 61  INTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCE 103


>ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 341

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/103 (60%), Positives = 74/103 (71%), Gaps = 10/103 (9%)
 Frame = -1

Query: 279 MAFSSIIT----SAPHVCLPKFTRPTLRRTIRCSIASISP------KFDLKTYWTALIEE 130
           MAF++ ++    +  H  LP  +   L RTIRC+  SIS       +FDL++YWT LI E
Sbjct: 1   MAFTTALSLPSAARLHHRLPNRSSLNLPRTIRCTSPSISVSPSKSMQFDLRSYWTTLISE 60

Query: 129 IDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACE 1
           I+ KL+EAIPVKYPQQIYEAMRYSVLAKG KRAPPVMCVA CE
Sbjct: 61  INTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCE 103


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