BLASTX nr result

ID: Scutellaria24_contig00010074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00010074
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...    72   4e-10
dbj|BAF01152.1| hypothetical protein [Arabidopsis thaliana]            71   6e-10
dbj|BAD94401.1| putative protein [Arabidopsis thaliana]                71   6e-10

>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = -2

Query: 1177 LSWDEARSKAAEKALGVVKSMLGQFPYKRQGSPRSMQELSYKRFKPEPSRVLQRMP-SIR 1001
            L+WDEA+ +AAEKALG +++M GQ+  KRQGSPR MQ +  KR K E  RVLQRMP S R
Sbjct: 899  LTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSPRLMQGMPNKRLKQEFPRVLQRMPSSAR 958

Query: 1000 HPKNA 986
            + KNA
Sbjct: 959  YHKNA 963


>ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1|
            predicted protein [Populus trichocarpa]
          Length = 224

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -2

Query: 1174 SWDEARSKAAEKALGVVKSMLGQFPYKRQGSPRSMQELSYKRFKPEPSRVLQRM-PSIRH 998
            +WDEA+ +AAEKALG +++M GQ+  KRQGSPR MQ +  KR K E  RVLQRM PS R+
Sbjct: 157  TWDEAKMQAAEKALGSLRTMFGQYTQKRQGSPRPMQGMPNKRLKQEFPRVLQRMPPSARY 216

Query: 997  PKNA 986
             KNA
Sbjct: 217  HKNA 220


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -2

Query: 1174 SWDEARSKAAEKALGVVKSMLGQFPYKRQGSPRSMQELSYKRFKPEPSRVLQRMP-SIRH 998
            ++DEA+ +AAEKALG +++  G+FP KRQGSPR +  +  K  KPE  RVLQRMP S R+
Sbjct: 911  TFDEAKMQAAEKALGSLRTTFGRFPPKRQGSPRPVPGMPNKHLKPEFPRVLQRMPSSARY 970

Query: 997  PKNA 986
            PKNA
Sbjct: 971  PKNA 974


>dbj|BAF01152.1| hypothetical protein [Arabidopsis thaliana]
          Length = 967

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = -2

Query: 1174 SWDEARSKAAEKALGVVKSMLGQFPYKRQGSPRSMQELSYKRFKPEPSRVLQRMPS 1007
            +WDEAR +AAE+AL  V+SMLGQ  +KRQGSPRS   +S KR KP+  R LQRMPS
Sbjct: 907  TWDEARMQAAERALSSVRSMLGQPLHKRQGSPRSFGGMSNKRLKPDFQRSLQRMPS 962


>dbj|BAD94401.1| putative protein [Arabidopsis thaliana]
          Length = 614

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = -2

Query: 1174 SWDEARSKAAEKALGVVKSMLGQFPYKRQGSPRSMQELSYKRFKPEPSRVLQRMPS 1007
            +WDEAR +AAE+AL  V+SMLGQ  +KRQGSPRS   +S KR KP+  R LQRMPS
Sbjct: 554  TWDEARMQAAERALSSVRSMLGQPLHKRQGSPRSFGGMSNKRLKPDFQRSLQRMPS 609


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