BLASTX nr result

ID: Scutellaria24_contig00009720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009720
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...   159   3e-37
ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ...   143   1e-32

>ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|222852105|gb|EEE89652.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  164 bits (414), Expect = 9e-39
 Identities = 91/136 (66%), Positives = 104/136 (76%), Gaps = 4/136 (2%)
 Frame = +1

Query: 7   MENLSLDISATNRFSRDLLQRFMGSASEH----GGSKQEGEEVELNLGLSMGGRFGVDKS 174
           ME+LSLDI   NR+ RDLLQRFM S ++         +E EE+ELNLGLS+GGRFGVDKS
Sbjct: 1   MESLSLDI---NRYPRDLLQRFMSSDAQQYQTATSDGEETEEIELNLGLSLGGRFGVDKS 57

Query: 175 SKKLARSSSVASCLPEERDDNDAEAAPPVVHTALVRTSSLPVETEEEWRKRKELQTLRRM 354
           SKKL RSSS+A  +P  RD  DA   PP  +  L+RTSSLP ETEEEWRKRKE+Q+LRRM
Sbjct: 58  SKKLTRSSSIAGSIPLLRD-YDALTTPPASYPLLMRTSSLPTETEEEWRKRKEMQSLRRM 116

Query: 355 EAKRRRSEKQRNLRSE 402
           EAKRRRSEKQRNLR E
Sbjct: 117 EAKRRRSEKQRNLRGE 132


>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
           gi|223549250|gb|EEF50739.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 355

 Score =  159 bits (401), Expect = 3e-37
 Identities = 85/137 (62%), Positives = 102/137 (74%), Gaps = 4/137 (2%)
 Frame = +1

Query: 7   MENLSLDISATNRFSRDLLQRFMGSASEH----GGSKQEGEEVELNLGLSMGGRFGVDKS 174
           ME+LSL+I   N++ RDLLQRFM + S+      G +   EE+ELNLGLS+GGRFGVDK+
Sbjct: 18  MESLSLEI---NKYPRDLLQRFMSNDSQQLKTSEGEEDNTEEIELNLGLSLGGRFGVDKT 74

Query: 175 SKKLARSSSVASCLPEERDDNDAEAAPPVVHTALVRTSSLPVETEEEWRKRKELQTLRRM 354
           SKKL RSSS+A  +P  RD +     P V +  L+RTSSLP ETEEEWRKRKE+QTLRRM
Sbjct: 75  SKKLTRSSSIAGSIPLVRDHDAFNTQPAVSYPLLIRTSSLPTETEEEWRKRKEMQTLRRM 134

Query: 355 EAKRRRSEKQRNLRSER 405
           EAKRRRSEKQ+NL   R
Sbjct: 135 EAKRRRSEKQKNLNLNR 151


>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  155 bits (393), Expect = 2e-36
 Identities = 85/136 (62%), Positives = 105/136 (77%), Gaps = 4/136 (2%)
 Frame = +1

Query: 7   MENLSLDISATNRFSRDLLQRFMGSASEH----GGSKQEGEEVELNLGLSMGGRFGVDKS 174
           ME+LSL+I   NR+ RDL+QR + S ++         +E EE+ELNLGLS+GGRFGVDK+
Sbjct: 1   MESLSLEI---NRYPRDLVQRLISSDAQQYKTATSEGEEAEEIELNLGLSLGGRFGVDKT 57

Query: 175 SKKLARSSSVASCLPEERDDNDAEAAPPVVHTALVRTSSLPVETEEEWRKRKELQTLRRM 354
           S+KL RSSS+A  +P  RD +DA + PPV +  L+RTSSLP ETEEEWRKRKE Q+LRRM
Sbjct: 58  SEKLTRSSSIAGSIPLLRD-HDALSTPPVSYPFLIRTSSLPTETEEEWRKRKENQSLRRM 116

Query: 355 EAKRRRSEKQRNLRSE 402
           EAKRRRSEKQ+NLR E
Sbjct: 117 EAKRRRSEKQKNLRGE 132


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/119 (64%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
 Frame = +1

Query: 52  RDLLQRFMGSASEHGG------SKQEGEEVELNLGLSMGGRFGVDKSSKKLARSSSVASC 213
           RDLLQR MG++ E          + + EE+ELNLGLS+GGRFGVDKS KKL RSSS+A  
Sbjct: 6   RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGS 65

Query: 214 LPEERDDNDAEAAPPVVHTALVRTSSLPVETEEEWRKRKELQTLRRMEAKRRRSEKQRN 390
           +   RD+ DA   P V +++L+RTSSLP ET+EEWRKRKELQTLRRMEAKRRRSEKQRN
Sbjct: 66  IGITRDE-DALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRRSEKQRN 123


>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
          Length = 360

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/119 (64%), Positives = 91/119 (76%), Gaps = 6/119 (5%)
 Frame = +1

Query: 52  RDLLQRFMGSASEHGG------SKQEGEEVELNLGLSMGGRFGVDKSSKKLARSSSVASC 213
           RDLLQR MG++ E          + + EE+ELNLGLS+GGRFGVDKS KKL RSSS+A  
Sbjct: 13  RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSIAGS 72

Query: 214 LPEERDDNDAEAAPPVVHTALVRTSSLPVETEEEWRKRKELQTLRRMEAKRRRSEKQRN 390
           +   RD+ DA   P V +++L+RTSSLP ET+EEWRKRKELQTLRRMEAKRRRSEKQRN
Sbjct: 73  IGITRDE-DALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRRSEKQRN 130


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