BLASTX nr result

ID: Scutellaria24_contig00009607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009607
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234982.1| uncharacterized protein LOC100306434 [Glycin...   104   3e-20
ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263...   103   7e-20
ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]...    97   5e-18
gb|AAP23938.1| one helix protein [Ipomoea nil]                         97   5e-18
ref|NP_195832.1| one helix protein [Arabidopsis thaliana] gi|328...    96   1e-17

>ref|NP_001234982.1| uncharacterized protein LOC100306434 [Glycine max]
           gi|255628527|gb|ACU14608.1| unknown [Glycine max]
          Length = 118

 Score =  104 bits (260), Expect = 3e-20
 Identities = 66/141 (46%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
 Frame = +2

Query: 365 MATSPA--FSSSLIAAGAPIFSAPTH-----HNAALLRHQKRVNFTIQAAKLPAGVXXXX 523
           MATS      SSLI A  P F++  H      N +L R +KRV+F +QAAK P GV    
Sbjct: 1   MATSSTTLLLSSLIPASIPSFNSGNHSVFLLQNRSLNRPKKRVSFVVQAAKPPIGVEIPK 60

Query: 524 XXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXLGFTRTAETWNSRACMIGLIGTFIVELI 703
                                           LGFT+TAE WNSRACMIG+IG FIVE I
Sbjct: 61  VQPQFKPPF-----------------------LGFTKTAEVWNSRACMIGIIGVFIVEFI 97

Query: 704 LNKGILQIIGVEVGKGLDIPL 766
           +NKGILQ+IGV+VGKGL+IPL
Sbjct: 98  INKGILQVIGVDVGKGLNIPL 118


>ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263187 [Vitis vinifera]
           gi|297740337|emb|CBI30519.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  103 bits (257), Expect = 7e-20
 Identities = 66/144 (45%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
 Frame = +2

Query: 365 MATSPAFSS-SLIAAGAPIFS------APTHHNA---ALLRHQKRVNFTIQAAKLPAGVX 514
           MATS   S+ S++   API S      +P +H +    + + +K+V+F +QAAKLP GV 
Sbjct: 1   MATSSPISALSVLPRSAPIVSLLNQQLSPFNHRSPCSTISQPKKKVSFRVQAAKLPPGVE 60

Query: 515 XXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXLGFTRTAETWNSRACMIGLIGTFIV 694
                                              LGFTRTAE WNSRACMIGLIG FIV
Sbjct: 61  LPKVEPKFEAPF-----------------------LGFTRTAEIWNSRACMIGLIGIFIV 97

Query: 695 ELILNKGILQIIGVEVGKGLDIPL 766
           ELILNKGILQ+IGV++GKGLD+PL
Sbjct: 98  ELILNKGILQVIGVDIGKGLDLPL 121


>ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]
           gi|222855050|gb|EEE92597.1| HLIP/One helix protein
           [Populus trichocarpa]
          Length = 119

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 61/142 (42%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
 Frame = +2

Query: 365 MAT-SPAFSSSLIAAGAPIFSAPTHHNAALLRHQKRVN-------FTIQAAKLPAGVXXX 520
           MAT S   SSS +    P+   P +   +L  H+ ++        F IQAAKLP GV   
Sbjct: 1   MATPSSLLSSSSLLLTKPVTLHPRNGKVSLFNHRSQIIKTSKEPVFRIQAAKLPPGVELP 60

Query: 521 XXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXLGFTRTAETWNSRACMIGLIGTFIVEL 700
                                            LGFTRTAE WNSRACM+GLIG F+VEL
Sbjct: 61  KVEPKFQAPF-----------------------LGFTRTAEIWNSRACMMGLIGVFVVEL 97

Query: 701 ILNKGILQIIGVEVGKGLDIPL 766
           I+NKGILQ+IGV++GKGLD+PL
Sbjct: 98  IINKGILQVIGVDIGKGLDLPL 119


>gb|AAP23938.1| one helix protein [Ipomoea nil]
          Length = 116

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 55/109 (50%), Positives = 65/109 (59%)
 Frame = +2

Query: 440 NAALLRHQKRVNFTIQAAKLPAGVXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXX 619
           + + + H+   +F +QAAKLPAGV                                    
Sbjct: 31  HTSTISHKPISSFKLQAAKLPAGVELPKEQPKLEPPF----------------------- 67

Query: 620 LGFTRTAETWNSRACMIGLIGTFIVELILNKGILQIIGVEVGKGLDIPL 766
           LGFTRTAE WNSRACMIGLIGTFIVELILN+GILQ+IGV+VGKGLD+PL
Sbjct: 68  LGFTRTAEIWNSRACMIGLIGTFIVELILNRGILQLIGVDVGKGLDLPL 116


>ref|NP_195832.1| one helix protein [Arabidopsis thaliana] gi|3283057|gb|AAC25108.1|
           one helix protein [Arabidopsis thaliana]
           gi|7340686|emb|CAB82985.1| one helix protein (OHP)
           [Arabidopsis thaliana] gi|17065540|gb|AAL32924.1| one
           helix protein (OHP) [Arabidopsis thaliana]
           gi|20148511|gb|AAM10146.1| one helix protein (OHP)
           [Arabidopsis thaliana] gi|332003050|gb|AED90433.1| one
           helix protein [Arabidopsis thaliana]
          Length = 110

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 63/137 (45%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
 Frame = +2

Query: 365 MATSPAFSSSLIAAGAPIFSAPTHHNAA---LLRHQKRVNFTIQAAKLPAGVXXXXXXXX 535
           M++SP  SSSL     P+ +  TH +     L  ++K+  F ++AAKLP GV        
Sbjct: 1   MSSSP-LSSSLFH---PLSTLSTHCHGRRQNLCFNRKQQPFVVRAAKLPEGVIVPKAQPK 56

Query: 536 XXXXXXXXXXXXXXVXXXXXXXXXXXXXLGFTRTAETWNSRACMIGLIGTFIVELILNKG 715
                                       LGFT+TAE WNSRACMIGLIGTFIVELILNKG
Sbjct: 57  SQPAF-----------------------LGFTQTAEIWNSRACMIGLIGTFIVELILNKG 93

Query: 716 ILQIIGVEVGKGLDIPL 766
           IL++IGVE+GKGLD+PL
Sbjct: 94  ILELIGVEIGKGLDLPL 110


Top