BLASTX nr result

ID: Scutellaria24_contig00009606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009606
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96960.1| hypothetical protein [Cleome spinosa]                   51   7e-09
ref|XP_002529115.1| uv excision repair protein rad23, putative [...    49   2e-08
gb|ACU18529.1| unknown [Glycine max]                                   45   3e-08
ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...    47   4e-08
ref|XP_002312393.1| predicted protein [Populus trichocarpa] gi|2...    49   5e-08

>gb|ABD96960.1| hypothetical protein [Cleome spinosa]
          Length = 435

 Score = 50.8 bits (120), Expect(2) = 7e-09
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +3

Query: 105 QLTPEEGEAIERLEAMGFD*ELVLEVFFARLQQQEREA 218
           Q+TPEE EAIERLEAMGFD  LVLEVFFA  + +E  A
Sbjct: 386 QVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAA 423



 Score = 33.9 bits (76), Expect(2) = 7e-09
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = +2

Query: 2   VNEPIEGREGINNMLGQLAGAAPQA 76
           +NEP+EG EG  N++ QLAG  PQA
Sbjct: 361 INEPVEGGEG-GNIINQLAGGVPQA 384


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score = 48.5 bits (114), Expect(2) = 2e-08
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +3

Query: 108 LTPEEGEAIERLEAMGFD*ELVLEVFFARLQQQEREA 218
           +TPEE EAIERLEAMGFD  LVLEVFFA  + +E  A
Sbjct: 361 VTPEEREAIERLEAMGFDRGLVLEVFFACNKNEELAA 397



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +2

Query: 2   VNEPIEGREGINNMLGQLAGAAPQA 76
           +NEP+EG EG  N++GQLA A PQA
Sbjct: 336 INEPVEGGEG--NIMGQLAAAMPQA 358


>gb|ACU18529.1| unknown [Glycine max]
          Length = 382

 Score = 44.7 bits (104), Expect(2) = 3e-08
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = +3

Query: 108 LTPEEGEAIERLEAMGFD*ELVLEVFFARLQQQEREA 218
           +TPEE +AIERLEAMGFD   VLEV+FA  + +E  A
Sbjct: 334 VTPEERQAIERLEAMGFDRATVLEVYFACNKNEELAA 370



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 2   VNEPIEGREGINNMLGQLAGAAPQA 76
           +NEP+EG EG  N+LGQLAGA PQA
Sbjct: 309 INEPVEGGEG--NILGQLAGAMPQA 331


>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score = 46.6 bits (109), Expect(2) = 4e-08
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +3

Query: 108 LTPEEGEAIERLEAMGFD*ELVLEVFFARLQQQEREA 218
           +TPEE EAI RLEAMGFD  LVLEVFFA  + +E  A
Sbjct: 349 VTPEEREAIARLEAMGFDRALVLEVFFACNKNEELAA 385



 Score = 35.4 bits (80), Expect(2) = 4e-08
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 2   VNEPIEGREGINNMLGQLAGAAPQA 76
           +NEP+EG EG  N+LGQLA A PQA
Sbjct: 324 INEPVEGGEG--NILGQLAAAMPQA 346


>ref|XP_002312393.1| predicted protein [Populus trichocarpa] gi|222852213|gb|EEE89760.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 48.9 bits (115), Expect(2) = 5e-08
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +3

Query: 108 LTPEEGEAIERLEAMGFD*ELVLEVFFARLQQQEREA 218
           +TPEE EAIERLEAMGFD  LVLEVFFA  + +E  A
Sbjct: 287 VTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAA 323



 Score = 33.1 bits (74), Expect(2) = 5e-08
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +2

Query: 2   VNEPIEGREGINNMLGQLAGAAPQA 76
           +NEP+E  EG  N+LGQLA A PQA
Sbjct: 262 INEPVESGEG--NVLGQLAAAMPQA 284


Top