BLASTX nr result

ID: Scutellaria24_contig00009418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009418
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              291   2e-76
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   291   2e-76
emb|CAN82988.1| hypothetical protein VITISV_011714 [Vitis vinifera]   291   2e-76
ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|2...   277   2e-72
ref|XP_004169706.1| PREDICTED: general transcription factor IIH ...   271   2e-70

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  291 bits (744), Expect = 2e-76
 Identities = 134/160 (83%), Positives = 144/160 (90%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYSCPRCKARVCELPTECQICG 181
           PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGY+CPRCKARVCELPTEC+ICG
Sbjct: 335 PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICG 394

Query: 182 LTLVSSPHLARSYHHLFPITPFDDVSPSVSNDP-RSLPKNCFGCQQSLLNPGNMPASCVS 358
           LTLVSSPHLARSYHHLFPI PFD+VS S+ N+P +   + CFGCQ+SLL PGN P  CV+
Sbjct: 395 LTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVA 454

Query: 359 CPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKSVGTVEE 478
           CPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK V   EE
Sbjct: 455 CPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 494


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
           vinifera]
          Length = 433

 Score =  291 bits (744), Expect = 2e-76
 Identities = 134/160 (83%), Positives = 144/160 (90%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYSCPRCKARVCELPTECQICG 181
           PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGY+CPRCKARVCELPTEC+ICG
Sbjct: 274 PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICG 333

Query: 182 LTLVSSPHLARSYHHLFPITPFDDVSPSVSNDP-RSLPKNCFGCQQSLLNPGNMPASCVS 358
           LTLVSSPHLARSYHHLFPI PFD+VS S+ N+P +   + CFGCQ+SLL PGN P  CV+
Sbjct: 334 LTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVA 393

Query: 359 CPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKSVGTVEE 478
           CPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK V   EE
Sbjct: 394 CPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 433


>emb|CAN82988.1| hypothetical protein VITISV_011714 [Vitis vinifera]
          Length = 199

 Score =  291 bits (744), Expect = 2e-76
 Identities = 134/160 (83%), Positives = 144/160 (90%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYSCPRCKARVCELPTECQICG 181
           PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGY+CPRCKARVCELPTEC+ICG
Sbjct: 40  PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICG 99

Query: 182 LTLVSSPHLARSYHHLFPITPFDDVSPSVSNDP-RSLPKNCFGCQQSLLNPGNMPASCVS 358
           LTLVSSPHLARSYHHLFPI PFD+VS S+ N+P +   + CFGCQ+SLL PGN P  CV+
Sbjct: 100 LTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVA 159

Query: 359 CPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKSVGTVEE 478
           CPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK V   EE
Sbjct: 160 CPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 199


>ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|222873701|gb|EEF10832.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  277 bits (709), Expect = 2e-72
 Identities = 128/152 (84%), Positives = 135/152 (88%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYSCPRCKARVCELPTECQICG 181
           PAIAEFAIANLIKMGFPQRAAEG ISICSCHKE+KVG GY CPRCKARVCELPTEC+ICG
Sbjct: 261 PAIAEFAIANLIKMGFPQRAAEGSISICSCHKESKVGEGYICPRCKARVCELPTECRICG 320

Query: 182 LTLVSSPHLARSYHHLFPITPFDDVSPSVSNDP-RSLPKNCFGCQQSLLNPGNMPASCVS 358
           LTLVSSPHLARSYHHLFPI PFD+V PS  N+P R   K CFGCQQSL+NPGN P+  V+
Sbjct: 321 LTLVSSPHLARSYHHLFPIAPFDEVKPSRQNEPHRRSQKTCFGCQQSLVNPGNKPSLQVA 380

Query: 359 CPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 454
           CPKCKQYFCLDCDIYIHESLHNCPGCES R S
Sbjct: 381 CPKCKQYFCLDCDIYIHESLHNCPGCESLRAS 412


>ref|XP_004169706.1| PREDICTED: general transcription factor IIH subunit 2-like, partial
           [Cucumis sativus]
          Length = 329

 Score =  271 bits (692), Expect = 2e-70
 Identities = 125/155 (80%), Positives = 137/155 (88%), Gaps = 3/155 (1%)
 Frame = +2

Query: 2   PAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYSCPRCKARVCELPTECQICG 181
           PAIA+ A+ NLIKMGFPQRAAE  I+ICSCHKEAKVGGGY+CPRCKARVCELPTEC+ICG
Sbjct: 169 PAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICG 228

Query: 182 LTLVSSPHLARSYHHLFPITPFDDVSPSVSNDPR-SLPKNCFGCQQSLLNP--GNMPASC 352
           LTL+SSPHLARSYHHLFPI PFD+VS  V +DPR  LPK CFGCQ+SL+NP  GN P+  
Sbjct: 229 LTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIR 288

Query: 353 VSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSK 457
           VSCPKCKQ+FCLDCDIYIHESLHNCPGCESFR  K
Sbjct: 289 VSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPK 323


Top