BLASTX nr result

ID: Scutellaria24_contig00009378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009378
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241...    69   9e-16
emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]    69   9e-16
ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|1...    65   3e-15
pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 3...    64   9e-15
ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216...    64   1e-14

>ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera]
          Length = 188

 Score = 68.6 bits (166), Expect(2) = 9e-16
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -1

Query: 893 SSSEAMPVFCPSLAYASTLFFKSGYNVQVIVEDNEPEERL 774
           SSS+ M V CPSLAY++TLFFKS YNVQVIVEDNEPEE+L
Sbjct: 68  SSSDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKL 107



 Score = 42.0 bits (97), Expect(2) = 9e-16
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 696 PEERLIGRFRREVFRAGVIQEC 631
           PEE+L+ RFRREV RAGVIQEC
Sbjct: 103 PEEKLLNRFRREVMRAGVIQEC 124


>emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]
          Length = 188

 Score = 68.6 bits (166), Expect(2) = 9e-16
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -1

Query: 893 SSSEAMPVFCPSLAYASTLFFKSGYNVQVIVEDNEPEERL 774
           SSS+ M V CPSLAY++TLFFKS YNVQVIVEDNEPEE+L
Sbjct: 68  SSSDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKL 107



 Score = 42.0 bits (97), Expect(2) = 9e-16
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 696 PEERLIGRFRREVFRAGVIQEC 631
           PEE+L+ RFRREV RAGVIQEC
Sbjct: 103 PEEKLLNRFRREVMRAGVIQEC 124


>ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|118487561|gb|ABK95607.1|
           unknown [Populus trichocarpa]
           gi|222847360|gb|EEE84907.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score = 65.5 bits (158), Expect(2) = 3e-15
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -1

Query: 890 SSEAMPVFCPSLAYASTLFFKSGYNVQVIVEDNEPEERL 774
           S+E   V CPSLAY++TLFFKS YNVQV+VEDNEPEERL
Sbjct: 58  STELSSVVCPSLAYSNTLFFKSAYNVQVVVEDNEPEERL 96



 Score = 43.1 bits (100), Expect(2) = 3e-15
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -3

Query: 696 PEERLIGRFRREVFRAGVIQEC 631
           PEERL+ RFRREV RAGVIQEC
Sbjct: 92  PEERLLNRFRREVMRAGVIQEC 113


>pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|17154781|gb|AAL35983.1|AF104396_1 ribosome-like
           protein [Cucumis sativus]
          Length = 190

 Score = 63.9 bits (154), Expect(2) = 9e-15
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -1

Query: 890 SSEAMPVFCPSLAYASTLFFKSGYNVQVIVEDNEPEERL 774
           S+E   V CPSLAYA+T+FF+S YNVQV+V+DNEPEERL
Sbjct: 72  SAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERL 110



 Score = 43.1 bits (100), Expect(2) = 9e-15
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -3

Query: 696 PEERLIGRFRREVFRAGVIQEC 631
           PEERL+ RFRREV RAGVIQEC
Sbjct: 106 PEERLLNRFRREVMRAGVIQEC 127


>ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216973 [Cucumis sativus]
           gi|449523367|ref|XP_004168695.1| PREDICTED:
           uncharacterized protein LOC101228071 [Cucumis sativus]
          Length = 183

 Score = 63.9 bits (154), Expect(2) = 1e-14
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -1

Query: 890 SSEAMPVFCPSLAYASTLFFKSGYNVQVIVEDNEPEERL 774
           S+E   V CPSLAYA+T+FF+S YNVQV+V+DNEPEERL
Sbjct: 65  SAELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERL 103



 Score = 43.1 bits (100), Expect(2) = 1e-14
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -3

Query: 696 PEERLIGRFRREVFRAGVIQEC 631
           PEERL+ RFRREV RAGVIQEC
Sbjct: 99  PEERLLNRFRREVMRAGVIQEC 120


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