BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00009266
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...   496   e-138
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...   490   e-136
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...   489   e-136
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   488   e-136
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...   486   e-135

>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
            gi|222833309|gb|EEE71786.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 1056

 Score =  496 bits (1277), Expect = e-138
 Identities = 251/373 (67%), Positives = 295/373 (79%)
 Frame = +1

Query: 1    QVQLKLGDLRSALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRD 180
            QVQLKLG++++AL+NFEKVLEV P+NC+TLK LGHIYVQL Q EKAQE  RKA KIDPRD
Sbjct: 347  QVQLKLGEIKNALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRD 406

Query: 181  PQAFLDLGDLLISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADE 360
             QAFLDLG+LLISTD  AALDAFKTARSLLKKG EEVP+++LNNI V+HFER E ELA +
Sbjct: 407  AQAFLDLGELLISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQ 466

Query: 361  AFREALGEGIWCDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVR 540
             F+EALG+GIW  F   +  +                             Y VDA S + 
Sbjct: 467  NFKEALGDGIWLTFLEGKANT-----------------------------YEVDATSSLL 497

Query: 541  QYKDLQLFHRLEEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTD 720
            QYKD+Q+F RLEE+G SVEL W+KV+ LFNLAR+ EQLH+TE+AS LYRLI+FKYPDY D
Sbjct: 498  QYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHNTETASTLYRLILFKYPDYVD 557

Query: 721  AYLRLAAMAKARNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAK 900
            AYLRLAA+AKARNN+ +S+EL+N+AL V++KC +AL MLGDLELKNDDWVKAKETFR A 
Sbjct: 558  AYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLGDLELKNDDWVKAKETFRAAS 617

Query: 901  DSTDAKDSYAAVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANG 1080
            ++TD KDSYA + LGNWNYFAA RNEKR PKLEATH EKAKELYT+VL+Q +ANLYAANG
Sbjct: 618  EATDGKDSYATLSLGNWNYFAAIRNEKRNPKLEATHLEKAKELYTRVLVQHTANLYAANG 677

Query: 1081 AGMVFAEKGQFDI 1119
            AG+V AEKG FD+
Sbjct: 678  AGVVLAEKGHFDV 690


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score =  490 bits (1262), Expect = e-136
 Identities = 247/374 (66%), Positives = 300/374 (80%), Gaps = 1/374 (0%)
 Frame = +1

Query: 1    QVQLKLGDLRSALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRD 180
            QVQLK+GDLRSAL+NFEKVLEV P+NC+TLK LGHIYVQL Q EKAQE  RKATKIDPRD
Sbjct: 347  QVQLKMGDLRSALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRD 406

Query: 181  PQAFLDLGDLLISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADE 360
             QAFLDLG+LLISTD +AALDAFKTA  LLKKG +EVP+++LNN+GVLHFER EFELA+ 
Sbjct: 407  AQAFLDLGELLISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAER 466

Query: 361  AFREALGEGIWCDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYP-VDADSVV 537
             F+EALG+GIW DF + +                              +R P ++A + V
Sbjct: 467  IFKEALGDGIWLDFIDGK------------------------------VRCPAIEASASV 496

Query: 538  RQYKDLQLFHRLEEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYT 717
             QYKD++LF++LE +G ++ LPW KV++LFNLAR+ EQLH  E +S+LYRLI+FKYPDY 
Sbjct: 497  LQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYV 556

Query: 718  DAYLRLAAMAKARNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTA 897
            DAYLRLA++AKARN VQ+S+EL+NDALKV++KC++AL MLG+LELKNDDWV+AKETFR A
Sbjct: 557  DAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLGELELKNDDWVRAKETFRAA 616

Query: 898  KDSTDAKDSYAAVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAAN 1077
             ++TD KDSYA + LGNWNYFAA RNEKR PKLEATH EK+KELYT+VL+Q  ANLYAAN
Sbjct: 617  GEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAAN 676

Query: 1078 GAGMVFAEKGQFDI 1119
            GAG++ AEKGQFD+
Sbjct: 677  GAGVILAEKGQFDV 690


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1086

 Score =  489 bits (1258), Expect = e-136
 Identities = 243/373 (65%), Positives = 293/373 (78%)
 Frame = +1

Query: 1    QVQLKLGDLRSALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRD 180
            QVQ+KLGD +SAL+NFEKVLEV P+NC+TLKALGHIYVQL Q +K Q+  RKATKIDPRD
Sbjct: 347  QVQIKLGDFKSALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRD 406

Query: 181  PQAFLDLGDLLISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADE 360
             QAFL+LG+LLI +D  AALDAFKTAR+L KKG +EVP++LLNNIGVL FERGEFELA +
Sbjct: 407  AQAFLELGELLILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQ 466

Query: 361  AFREALGEGIWCDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVR 540
             F+EALG+G+W  F N E++S                               +DA +   
Sbjct: 467  TFKEALGDGVWLSFINEEKKS------------------------------SIDAATSTL 496

Query: 541  QYKDLQLFHRLEEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTD 720
            Q+KD++LFH LE  G  VE+PWDKV+ LFNLAR+ EQL+D+ +ASILYRL++FKYPDY D
Sbjct: 497  QFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLNDSGTASILYRLVLFKYPDYID 556

Query: 721  AYLRLAAMAKARNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAK 900
            AYLRLAA+AKARNN+ +S+EL+NDALKV+ KC +AL MLG+LELKNDDWVKAKET R A 
Sbjct: 557  AYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELKNDDWVKAKETLRAAS 616

Query: 901  DSTDAKDSYAAVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANG 1080
            D+T+ KDSYA++ LGNWNYFAA RNEKR PKLEATH EKAKELYT+VL+Q S+NLYAANG
Sbjct: 617  DATEGKDSYASLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSSNLYAANG 676

Query: 1081 AGMVFAEKGQFDI 1119
            A +V AEKG FD+
Sbjct: 677  AAVVLAEKGHFDV 689


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score =  488 bits (1257), Expect = e-136
 Identities = 246/374 (65%), Positives = 299/374 (79%), Gaps = 1/374 (0%)
 Frame = +1

Query: 1    QVQLKLGDLRSALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRD 180
            QVQLK+GDLRSAL+NFEKVLEV P+NC+TLK LGHIYVQL Q EKAQE  RKATKIDPRD
Sbjct: 323  QVQLKMGDLRSALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRD 382

Query: 181  PQAFLDLGDLLISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADE 360
             QAFLDLG+LLISTD +AALDAFKTA  LLKKG +EVP+++LNN+GVLHFER EFELA+ 
Sbjct: 383  AQAFLDLGELLISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAER 442

Query: 361  AFREALGEGIWCDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYP-VDADSVV 537
             F+EALG+GIW DF + +                              +R P ++A + V
Sbjct: 443  IFKEALGDGIWLDFIDGK------------------------------VRCPAIEASASV 472

Query: 538  RQYKDLQLFHRLEEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYT 717
             QYKD++LF++LE +G ++ LPW KV++LFNLAR+ EQLH  E +S+LYRLI+FKYPDY 
Sbjct: 473  LQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHRIEVSSVLYRLILFKYPDYV 532

Query: 718  DAYLRLAAMAKARNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTA 897
            DAYLRLA++AKARN VQ+S+EL+NDALKV++KC++AL MLG+LE KNDDWV+AKETFR A
Sbjct: 533  DAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLGELEXKNDDWVRAKETFRAA 592

Query: 898  KDSTDAKDSYAAVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAAN 1077
             ++TD KDSYA + LGNWNYFAA RNEKR PKLEATH EK+KELYT+VL+Q  ANLYAAN
Sbjct: 593  GEATDGKDSYATLSLGNWNYFAALRNEKRNPKLEATHLEKSKELYTRVLVQHPANLYAAN 652

Query: 1078 GAGMVFAEKGQFDI 1119
            GAG++ AEKGQFD+
Sbjct: 653  GAGVILAEKGQFDV 666


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score =  486 bits (1250), Expect = e-135
 Identities = 244/373 (65%), Positives = 289/373 (77%)
 Frame = +1

Query: 1    QVQLKLGDLRSALTNFEKVLEVQPENCDTLKALGHIYVQLEQNEKAQELYRKATKIDPRD 180
            QVQ+KLGD +SAL+NFEKVLEV P+NC+TLKALGHIYVQL Q +K Q+  RKATKIDPRD
Sbjct: 350  QVQIKLGDFKSALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRD 409

Query: 181  PQAFLDLGDLLISTDINAALDAFKTARSLLKKGNEEVPLDLLNNIGVLHFERGEFELADE 360
             QAFL+LG+LLI +D  AALDAFKTA +L KKG +EVP++LLNNIGVL FERGEFELA +
Sbjct: 410  AQAFLELGELLILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQ 469

Query: 361  AFREALGEGIWCDFFNAERESISNSEQTNAYGEQLSPSRRSRAKMIHSLRYPVDADSVVR 540
             F+EALG+G+W  F N E +S                               +DA +   
Sbjct: 470  TFKEALGDGVWLSFINEENKS------------------------------SIDAATSTL 499

Query: 541  QYKDLQLFHRLEEQGLSVELPWDKVSALFNLARVQEQLHDTESASILYRLIIFKYPDYTD 720
            Q+KD+QLFH LE  G  VE+PWDKV+ LFNLAR+ EQL+D+ +ASI YRLI+FKYPDY D
Sbjct: 500  QFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYDSGTASIFYRLILFKYPDYID 559

Query: 721  AYLRLAAMAKARNNVQISLELINDALKVDEKCTDALLMLGDLELKNDDWVKAKETFRTAK 900
            AYLRLAA+AKARNN+ +S+EL+NDALKV+ KC +AL MLG+LELKNDDWVKAKET RTA 
Sbjct: 560  AYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLGELELKNDDWVKAKETLRTAS 619

Query: 901  DSTDAKDSYAAVCLGNWNYFAANRNEKRAPKLEATHYEKAKELYTKVLLQQSANLYAANG 1080
            D+TD KDSYA + LGNWNYFAA RNEKR PKLEATH EKAKEL T+VL+Q S+NLYAANG
Sbjct: 620  DATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELCTRVLIQHSSNLYAANG 679

Query: 1081 AGMVFAEKGQFDI 1119
            A +V AEKG FD+
Sbjct: 680  AAVVLAEKGHFDV 692